Thiomicrospira microaerophila: JX580_06665
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Entry
JX580_06665 CDS
T08259
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
tmh
Thiomicrospira microaerophila
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tmh03029
]
JX580_06665 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tmh02000
]
JX580_06665 (bamA)
Mitochondrial biogenesis [BR:
tmh03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
JX580_06665 (bamA)
Transporters [BR:
tmh02000
]
Other transporters
Pores ion channels [TC:
1
]
JX580_06665 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_2
POTRA_1
YqfD
ShlB
Omp85_2
TcA_TcB_BD
Motif
Other DBs
NCBI-ProteinID:
UQB41376
LinkDB
All DBs
Position
complement(1361413..1363692)
Genome browser
AA seq
759 aa
AA seq
DB search
MFKSTLKKPVLALSLAFLSSNILAGEFVISEILIEGNERIGFETVNTYLPVSLGELMTAD
KERASLRALYRTGFFSDLALYRGDNGQLIIKLVERPSIAEVEIKGNKLIKTDDLKQALLS
LGISQGKMFNSLEMDRVIVDLKRQYHNQGYYAAAIDITAESLPRNRVAISIQVDEGKPAS
IERISLVGNQAFSDQRLLGLLQSKEHVIIGSGDKYARPKLQADLETLRSFYMDRGFAEFN
IDSSQVSLSTDKTKVFISINMTEGPQYKLDEIRFSGQLLLTEEELNNLAQLESGQVFSRS
EIIRAINAIRDKLSEAGYAFAEVDPRTIINEETRLVSLDFYIEPRNRVYVRNIEVEGNTR
TRDYVLRREMRQFESAPYSLAAVRQSTSRLNRLGYFSRVNIDTRRISEDEVDLIIQVEEQ
PTGSFTAGIGYSQLDGVSFNLGISEKNFLGTGNEMNLTLNSSSSMQSADLGYTNPYFTDS
GVSLGQGIYYSKINAAKLNITDYTLDKLGVRVNLGYPTSELTRLNFGLRAEAQTLKCVTA
FEACTDHLDNYSADNEYLLFTAGWRYDSRNQFYFPTKGQLTSISLQAVVPGTSDMTFYKV
FLDESWYTPLSENFTLKLNGSLAYGSGYGKAKTLPFFERFYAGGIGSVRGFDPNSLGGYY
TDVNRPKGADVRTLAGAEIVFPMPLIEDSSNLRLSWFFDAGYVFDELKEVSVSDFRSATG
LAFSWLTPVGPLAFSFSRPVHYEKTDRLQSFQFSLGMPF
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaagcactttaaagaagccagtactggcattgagtttagcctttttatcatcg
aatatcttagctggtgagtttgttatcagtgagattttgatagagggcaatgagcgtatt
ggttttgaaacggtgaatacctatctccctgttagtcttggcgagcttatgacggctgac
aaggagcgtgcaagtttgcgtgcactttataggacaggtttttttagcgatttggcactc
tatcggggtgacaatggacagttgattattaaactggttgagaggccttcgattgccgag
gttgaaattaagggtaataagctaataaaaaccgatgacctcaagcaagctttgttgtcc
ttaggtatcagtcagggcaagatgtttaatagtttagaaatggacagggtgattgttgat
ttaaaacgtcaatatcataaccaaggttactatgctgctgcgattgatatcactgcggaa
tcacttccaagaaatcgggttgcgatcagtattcaggtagatgaaggaaaaccagccagt
attgaacgtattagtttggttggcaaccaggcttttagtgatcagcgtctattagggttg
cttcagtcaaaagagcatgtgattattggtagcggtgataagtatgctcgacctaagctt
caggctgatttagaaaccttacgctcattttatatggatcgtggatttgctgagtttaat
attgattcatctcaagtatcgctttctacagataaaacgaaggtgtttatatcaattaat
atgactgaaggtcctcagtataaacttgatgagattcgtttttccggtcagttattacta
actgaagaagagttaaataatttagcacagttagaaagtggccaggtattttcaaggtct
gaaattattagggcaatcaatgcgattcgagataaactcagtgaagcgggttatgcgttc
gctgaagtcgatccaagaacgatcattaatgaagaaacaagattggttagtttagatttt
tatattgagccgcgtaatcgtgtttatgttcgtaatattgaagtggaaggcaatactcga
acccgtgactatgttcttcgccgagaaatgcgtcagttcgaaagcgcaccttactctttg
gctgcggtaagacaatcgactagccgcttaaaccgtttaggttatttttcaagagttaat
attgatactcgtcgcatatctgaagatgaagtagatcttattattcaggttgaagagcaa
ccaaccggttcatttacagctggtattggttattctcaattggacggtgttagttttaac
ctaggaatctccgagaagaattttttaggaacgggtaatgaaatgaacttgacattgaat
tcaagttcttcaatgcaatcggctgatttgggctataccaacccttattttacagacagt
ggcgtgagtttagggcagggtatttattacagtaagattaatgcggctaaattaaatatt
accgactacaccttggataaattaggggttcgtgttaatttgggatacccaaccagtgaa
ttgacacgtttaaattttggtttacgcgctgaggcacagacacttaaatgtgtgacggct
tttgaagcttgtaccgaccacttggataactacagcgctgataatgaatatttattattt
actgctggttggcgttacgatagccgcaatcagttttatttcccgaccaaggggcagtta
accagtatttcattgcaggctgttgtacctggaacatcggatatgacgttttataaggtg
tttttagatgaaagctggtacacccccttgtcggaaaactttacattgaagttaaatggc
tctttagcttatggttcgggttatggtaaagcaaaaacgctaccattttttgaaagattt
tatgctggtgggataggttctgttagaggtttcgatcctaattcgctgggtggttactat
accgatgtgaaccgccctaagggtgctgacgtcagaactttagccggcgctgaaatagtt
ttccctatgccattaattgaagattcttcaaatttacgtttaagttggttctttgacgct
ggctatgtttttgatgaattgaaggaagtctctgtttctgattttagatcagcaacgggt
ttagctttttcttggttaacccctgtagggcctttagcatttagtttctctcgccctgtt
cattatgaaaaaaccgacagattgcagtcctttcagtttagtttaggcatgccattttag
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