Thiomicrospira microaerophila: JX580_06730
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Entry
JX580_06730 CDS
T08259
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh00300
Lysine biosynthesis
tmh01100
Metabolic pathways
tmh01120
Microbial metabolism in diverse environments
tmh01230
Biosynthesis of amino acids
Module
tmh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JX580_06730 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tmh01002
]
JX580_06730 (dapE)
Enzymes [BR:
tmh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
JX580_06730 (dapE)
Peptidases and inhibitors [BR:
tmh01002
]
Metallo peptidases
Family M20
JX580_06730 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
UQB41388
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Position
1375264..1376403
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AA seq
379 aa
AA seq
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MSPTISLARQLLQIDSVTPDDKGCQTLIGDFLAPLGFDLEPMPFGEVTNLWARKGDTKPL
VVFAGHTDVVPTGPIEKWQYPPFSAQIDGDMLCARGSADMKSSIACFMVATERFLQDYPD
HLGSIGFLITSDEEGPAVNGTVKVIETLEARQEKINYCLVGEPSSDEKLGDSIKNGRRGS
LNGRLTIKGIQGHIAYPQLADNPVHKALPALNALTGIIWDNGNEYFPPTSFQISNVQSGT
GATNVIPGEIQVMFNFRFSTEHTPDSLKQGVIDCLNSFDLDYEIDWNLSGLPFVTPAEGE
LIQATGDAIETIMGYRPTLSTAGGTSDGRFIAPTGAQVIEFGPLNATIHKLNERVSVSDL
NKLTDIYYQILVNLLTKAA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagcccaacaatttcgcttgcacgtcaattattacaaattgattctgtgacacccgat
gacaaaggctgtcaaacactcattggcgactttttagctcccctaggatttgatttggag
ccgatgccgtttggcgaagtgaccaacctgtgggctcgcaaaggcgacaccaaaccactt
gtagtatttgcgggtcataccgatgttgtgccaactggcccgattgaaaaatggcaatac
ccgccgtttagtgcgcagattgatggtgacatgctctgcgcacgcggttcagctgatatg
aaaagctcaattgcctgttttatggtcgccaccgaacgttttttgcaagattaccctgac
cacttgggttcaatcggttttttgatcaccagtgatgaagaaggccctgctgtcaatggc
acagttaaagtgattgaaaccctcgaagctcgccaagaaaaaattaactattgcttggtc
ggcgaaccttcaagtgatgaaaaactcggcgattcgattaaaaacgggcgacgtggttca
ctgaatggtcgcttaaccatcaaaggtattcaagggcatattgcctacccccaattagca
gacaatccagtgcacaaggctttgccagcactgaacgcgctaacgggcatcatctgggat
aacggcaatgaatattttccgccaaccagctttcaaatctcgaatgttcagtccggcacc
ggtgctaccaatgtaattccaggtgagattcaggtgatgtttaattttcgtttctccacc
gaacacacaccggattcgttaaaacaaggcgtgatcgattgcttgaatagctttgattta
gactatgaaattgactggaatttatctggcttaccgtttgttacgccggccgagggtgag
ctgattcaggccaccggtgatgcgattgaaacgattatgggttatcgccctacgctttca
accgcaggcggcacctccgatggtcggtttatcgcaccgacgggggcgcaagtcattgag
tttggccccttaaacgcaacgattcacaagcttaacgaacgggttagtgtttcagattta
aacaaactcactgatatttactatcaaattcttgtcaacttattgaccaaggcggcttaa
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