Thiomicrospira microaerophila: JX580_06780
Help
Entry
JX580_06780 CDS
T08259
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh00020
Citrate cycle (TCA cycle)
tmh00640
Propanoate metabolism
tmh00660
C5-Branched dibasic acid metabolism
tmh00720
Other carbon fixation pathways
tmh01100
Metabolic pathways
tmh01110
Biosynthesis of secondary metabolites
tmh01120
Microbial metabolism in diverse environments
tmh01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JX580_06780 (sucD)
00640 Propanoate metabolism
JX580_06780 (sucD)
00660 C5-Branched dibasic acid metabolism
JX580_06780 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
JX580_06780 (sucD)
Enzymes [BR:
tmh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
JX580_06780 (sucD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UQB41397
LinkDB
All DBs
Position
complement(1385386..1386258)
Genome browser
AA seq
290 aa
AA seq
DB search
MSILINKHTRVICQGFTGKQGTFHSEQALAYGTQMVGGVTPGKGGQTHLGLPVFNTVRDA
VAQTGAEASMIYVPPAFAADSIIEAIDAGIKVIACITEGIPVNDMLKVRAVLDASDSYLI
GPNCPGLITPGECKIGIMPGHIHLPGKIGVVSRSGTLTYEAVHQTTQNGLGQSTCVGIGG
DPIHGMNFIDCLTLFEQDPQTEGIIMVGEIGGQAEEDAAEFIQAHVSKPVVAYIAGVTAP
AGKRMGHAGAIVSGGKGTAEAKFAALEAAGVTVVRSPTDLGSAIKQRLQG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagtattttaattaacaaacacacccgcgtgatttgccaaggattcaccggtaagcag
ggcacatttcattctgaacaggcgttggcctatggtacccaaatggtcggtggtgttacc
ccgggtaaaggcgggcaaacgcatttaggtttgccggtatttaatactgtgagagatgcg
gtggcgcaaaccggtgctgaggcatcaatgatttatgtgccgccagcctttgcggctgat
tcgattattgaggcgattgatgccggtattaaagtaattgcctgtattaccgagggcatt
ccggtgaatgatatgttgaaggtgcgtgcggtgttagatgcctctgatagctatttaatc
ggccccaactgtccaggtttgatcacaccgggcgaatgtaaaattggtattatgcccggt
catattcatttaccaggtaaaatcggtgtggtgtcgcgttccggcacacttacctatgaa
gccgtgcatcaaaccacgcaaaatggtttgggtcaatccacctgtgttggcattggtggc
gacccgattcatggtatgaactttattgattgtttgaccctgtttgagcaggatccgcaa
accgaaggcattattatggttggcgagattggcggccaggcagaagaagacgcggctgag
tttattcaagcccacgtcagcaaacccgtggtcgcctacattgcgggggtgacggctccc
gcaggtaagcgcatgggacatgctggagcgattgtcagtggtggaaaaggtacagcggaa
gccaagttcgccgcacttgaagcggccggggtgaccgtggttcgttcgcccaccgattta
ggctcggccatcaagcagcgattacaaggttaa
DBGET
integrated database retrieval system
