KEGG   Thiomicrospira microaerophila: JX580_06925
Entry
JX580_06925       CDS       T08259                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
tmh  Thiomicrospira microaerophila
Brite
KEGG Orthology (KO) [BR:tmh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tmh03032]
    JX580_06925
   03036 Chromosome and associated proteins [BR:tmh03036]
    JX580_06925
   03400 DNA repair and recombination proteins [BR:tmh03400]
    JX580_06925
DNA replication proteins [BR:tmh03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    JX580_06925
Chromosome and associated proteins [BR:tmh03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    JX580_06925
DNA repair and recombination proteins [BR:tmh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      JX580_06925
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: UQB41421
LinkDB
Position
complement(1407333..1407605)
AA seq 90 aa
MNKSELVSAIAEKAGLTKVQAASALDATVASVTAALAKGDQVAIIGFGTFKVGERAARTG
RNPQTGAEMQIPAAKVPKFAAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaatctgaattagtaagcgcgattgcagaaaaagctggcttaacaaaagtacaa
gctgctagtgcgttagatgcgacggttgcaagtgttacagctgctttagctaagggtgac
caggttgcgatcatcggtttcggtacctttaaagttggtgaacgcgctgcacgtacagga
cgcaatccacaaactggcgctgaaatgcagattccagcggccaaagtaccgaaatttgct
gctggtaaggctcttaaggatgcggttaactaa

DBGET integrated database retrieval system