Thiomicrospira microaerophila: JX580_07185
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Entry
JX580_07185 CDS
T08259
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JX580_07185 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tmh01007
]
JX580_07185 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmh03016
]
JX580_07185 (aspS)
03029 Mitochondrial biogenesis [BR:
tmh03029
]
JX580_07185 (aspS)
Enzymes [BR:
tmh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
JX580_07185 (aspS)
Amino acid related enzymes [BR:
tmh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JX580_07185 (aspS)
Transfer RNA biogenesis [BR:
tmh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JX580_07185 (aspS)
Prokaryotic type
Other AARSs
JX580_07185 (aspS)
Mitochondrial biogenesis [BR:
tmh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
JX580_07185 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Atu4866
Motif
Other DBs
NCBI-ProteinID:
UQB41470
LinkDB
All DBs
Position
complement(1457035..1458819)
Genome browser
AA seq
594 aa
AA seq
DB search
MRTHYCGQVTEALIGQTVSVAGWVHRRRDHGGVIFIDLRDREGLVQVVVDPDTAEIFAKA
EHLRSECVLRISGIVRARPEGTANANLTSGQIEMLAKELDVLSMAEPIPFQLDDKHISEE
VRLKYRYIDLRREEMQKTLKLRYAVTRSMRNYLDNNGFIDMETPILTKSTPEGARDYLVP
SRTHEHKFFALPQSPQLFKQLLMMSGFDRYYQITRCFRDEDLRADRQPEFTQLDIETSFM
DENGVMGLMEGLTKTIFKEGIGVEFDYDFPQMTYADAIQKYGIDRPDLRIPLELVDVADL
LQDIEFKVFAGPAKDPKGRVAALCVPGAGEMSRKEIDDYTKFVGIYGAKGLAYIKVNDIA
AGIDGLQSPIVKFFPDQVMQILERVGAKDGDIVFFGADKAKIVNEALGALRVKIGEDRQM
FTDKWKPVWVVDFPMFEEDEKTARVAAMHHPFTQPKATTEEILASKNPGQMLARAYDLVI
NGIEVGGGSVRIHDTNMQAAVFKLLGISDEDAAEKFGFLLNALKYGCPPHAGMAFGLDRL
IMLMADRESIRDVIAFPKTQSAACLLTEAPGLVEMAQLRELNIRLNKKVAEASH
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacacattattgtggtcaggtaacagaagcactcattggtcaaaccgttagcgtt
gcgggttgggttcatcgtcgtcgtgaccatggtggcgttatttttatagacttacgtgac
cgcgaaggtttggtgcaggtggttgtggatccggatacggcagaaatttttgctaaggct
gagcatttgcgttctgaatgtgtgttgcgtatcagcggtattgttcgtgcccgtccggaa
ggcacggcgaatgccaatttaacctcaggtcaaattgaaatgttggcgaaagagctggat
gtgctcagcatggcagagccgattcctttccagttggatgacaagcatatcagtgaggaa
gtgcgtttaaagtaccgttatattgacttgcgtcgtgaggaaatgcaaaaaaccctcaag
ctgcgttatgcggtaactcgttcaatgcgtaattacttggataataacggctttattgat
atggagactcctattctcaccaagtcaacgcctgaaggtgcgcgtgattatctggtacct
agccgtacccatgaacataagttttttgcgctaccacaatcgccgcaattgtttaagcag
ttgttaatgatgtctggctttgatcgttattatcaaattacccgttgtttccgtgatgag
gatttacgcgcggatcgtcaacctgaattcacccagttagatatcgagacctcgtttatg
gatgaaaatggggtgatggggttgatggaaggtttgaccaagacgatatttaaagaaggc
attggggtcgagtttgattatgatttcccgcaaatgacctatgccgatgcgattcaaaag
tatggcattgatcgtccagacttacgtattccgctagagttggttgatgtcgctgattta
ttgcaagacatcgagtttaaagtatttgccggaccggcaaaagatccaaaaggccgtgtg
gcggccttatgtgtgccaggtgcgggcgaaatgtcgcgtaaagaaatcgacgattacacc
aagtttgttggtatttacggagccaaaggtttggcctatatcaaggtaaatgatattgcc
gccggtattgatggcttacagtcgccgattgtgaaattcttcccggatcaagtcatgcag
attcttgagcgtgttggcgctaaagatggtgatattgtgttctttggtgcggataaagcc
aaaatcgtcaacgaagcgctaggcgcattgcgagttaagatcggtgaagatcgtcaaatg
ttcaccgataaatggaagccagtatgggtagtcgatttcccgatgtttgaggaagatgaa
aaaaccgcgcgcgttgcggcgatgcatcatccatttactcagcctaaagcaaccaccgaa
gaaattttagcctcgaagaacccagggcaaatgttagcgcgtgcctatgacttggtgatt
aacggtattgaagtcggcggtggttcagtgcgtatccacgatacaaatatgcaggcggcc
gtgtttaaattgttaggtattagcgacgaagatgcggcggagaagtttggtttcttatta
aatgcgctgaaatacggttgccctccgcatgcgggtatggcgtttggtttagatcgtttg
attatgctgatggccgaccgtgaatcgattcgtgatgtgattgctttcccgaaaacacag
tcagcggcctgcttattaaccgaggcaccaggcctggtggaaatggcgcagttgcgtgaa
cttaatattcgtttgaataaaaaagtcgccgaagcgagccattga
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