KEGG   Thiomicrospira microaerophila: JX580_07265
Entry
JX580_07265       CDS       T08259                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
tmh  Thiomicrospira microaerophila
Pathway
tmh00260  Glycine, serine and threonine metabolism
tmh00460  Cyanoamino acid metabolism
tmh00630  Glyoxylate and dicarboxylate metabolism
tmh00670  One carbon pool by folate
tmh00680  Methane metabolism
tmh01100  Metabolic pathways
tmh01110  Biosynthesis of secondary metabolites
tmh01120  Microbial metabolism in diverse environments
tmh01200  Carbon metabolism
tmh01230  Biosynthesis of amino acids
tmh01240  Biosynthesis of cofactors
tmh04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:tmh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    JX580_07265
  09102 Energy metabolism
   00680 Methane metabolism
    JX580_07265
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    JX580_07265
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    JX580_07265
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    JX580_07265
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    JX580_07265
Enzymes [BR:tmh01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     JX580_07265
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase OKR_DC_1 DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: UQB41484
LinkDB
Position
complement(1470329..1471600)
AA seq 423 aa
MFDKTMTIAGYDDDIANAMAAEAQRQEDHIELIASENYTSPRVMEAQGSVLTNKYAEGYP
YKRYYGGCEHVDVVEALAIERAKQLFGADYANVQPHSGSQANAPVYMALLEPGDTVLGMS
LAHGGHLTHGSKVNFSGKIYNAVQYGLNPTTGEIDYDEVERLAQEHKPKLVVAGFSAYSQ
IVDWQRFRDIADSVGAYLLVDMAHVAGLVAAGLYPNPVQIADVTTTTTHKTLRGPRGGLI
LAKANPEIEKKLNSLVFPGTQGGPLMHVIAAKAVAFKEAMEPEFKTYAAQVIKNAQAMAE
VFIERGLDVVSGGTKNHLFLVSLIEKGLTGKLVDAALGAAHITINKNSVPNDPMSPFVTS
GIRVGTAAATTRGFGEQECRDLAGWMCDVVDACDQASESWDETVIAQVRQKVSALCAAHP
VYK
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgtttgataaaaccatgacaatcgctggctatgatgatgatatcgctaatgcgatggcg
gctgaagcccagcgccaagaagatcacattgaattgatcgcttctgaaaactataccagc
ccgcgtgttatggaagcgcaaggctctgtgttaaccaataagtatgcagagggttatccc
tataagcgttattatggcggttgtgagcatgtagacgtggttgaagctttggcgatagaa
cgtgcaaagcaattgtttggcgcggattacgctaacgtccagcctcactcaggttcgcag
gcgaatgcaccggtttatatggctttgttagagccgggtgatacggtattaggtatgagt
ttggcgcatggtggtcatttaactcacggttctaaggttaacttttccggcaaaatctac
aatgcggtgcagtatggcttaaaccctaccaccggtgaaattgactatgatgaagtcgaa
cgtctagctcaagaacacaagcctaagttagtggtggccggtttttctgcttattcgcaa
attgttgattggcagcgtttccgtgatattgccgatagcgtcggtgcttatttattagtt
gatatggcgcacgtggcaggcttggttgcggcgggtttatatcctaatccggtgcaaatt
gccgatgttaccactaccacaacccacaaaaccttacgcggtcctcgtggtggtttgatc
cttgccaaagcgaatcctgagattgagaaaaaattgaattcattggtgttcccggggaca
caaggtgggccgttaatgcacgtgatcgcggcaaaagcggtggcatttaaagaggcgatg
gagccggagttcaaaacctatgccgcccaggtaattaaaaacgctcaggcgatggcggaa
gtatttatcgagcgtggcttggatgtggtttcgggtggtactaaaaaccatttgttcctt
gtcagtctgattgaaaaaggcttaaccggtaagctagtcgatgcggccttgggtgctgcg
cacatcacgattaacaaaaactctgtgccgaatgatcctatgtcaccgtttgtcaccagt
ggtattcgtgtcggtaccgcggcggctaccacccgtggttttggtgagcaggaatgtcgt
gatctagctggttggatgtgtgatgtggtggatgcttgtgatcaggcttcggaaagctgg
gatgaaaccgtaattgctcaggttcgccagaaagtcagtgcactttgcgctgcgcaccct
gtttacaagtaa

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