Thiomicrospira microaerophila: JX580_07265
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Entry
JX580_07265 CDS
T08259
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh00260
Glycine, serine and threonine metabolism
tmh00460
Cyanoamino acid metabolism
tmh00630
Glyoxylate and dicarboxylate metabolism
tmh00670
One carbon pool by folate
tmh00680
Methane metabolism
tmh01100
Metabolic pathways
tmh01110
Biosynthesis of secondary metabolites
tmh01120
Microbial metabolism in diverse environments
tmh01200
Carbon metabolism
tmh01230
Biosynthesis of amino acids
tmh01240
Biosynthesis of cofactors
tmh04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JX580_07265
09102 Energy metabolism
00680 Methane metabolism
JX580_07265
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JX580_07265
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JX580_07265
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JX580_07265
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JX580_07265
Enzymes [BR:
tmh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JX580_07265
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UQB41484
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Position
complement(1470329..1471600)
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AA seq
423 aa
AA seq
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MFDKTMTIAGYDDDIANAMAAEAQRQEDHIELIASENYTSPRVMEAQGSVLTNKYAEGYP
YKRYYGGCEHVDVVEALAIERAKQLFGADYANVQPHSGSQANAPVYMALLEPGDTVLGMS
LAHGGHLTHGSKVNFSGKIYNAVQYGLNPTTGEIDYDEVERLAQEHKPKLVVAGFSAYSQ
IVDWQRFRDIADSVGAYLLVDMAHVAGLVAAGLYPNPVQIADVTTTTTHKTLRGPRGGLI
LAKANPEIEKKLNSLVFPGTQGGPLMHVIAAKAVAFKEAMEPEFKTYAAQVIKNAQAMAE
VFIERGLDVVSGGTKNHLFLVSLIEKGLTGKLVDAALGAAHITINKNSVPNDPMSPFVTS
GIRVGTAAATTRGFGEQECRDLAGWMCDVVDACDQASESWDETVIAQVRQKVSALCAAHP
VYK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataaaaccatgacaatcgctggctatgatgatgatatcgctaatgcgatggcg
gctgaagcccagcgccaagaagatcacattgaattgatcgcttctgaaaactataccagc
ccgcgtgttatggaagcgcaaggctctgtgttaaccaataagtatgcagagggttatccc
tataagcgttattatggcggttgtgagcatgtagacgtggttgaagctttggcgatagaa
cgtgcaaagcaattgtttggcgcggattacgctaacgtccagcctcactcaggttcgcag
gcgaatgcaccggtttatatggctttgttagagccgggtgatacggtattaggtatgagt
ttggcgcatggtggtcatttaactcacggttctaaggttaacttttccggcaaaatctac
aatgcggtgcagtatggcttaaaccctaccaccggtgaaattgactatgatgaagtcgaa
cgtctagctcaagaacacaagcctaagttagtggtggccggtttttctgcttattcgcaa
attgttgattggcagcgtttccgtgatattgccgatagcgtcggtgcttatttattagtt
gatatggcgcacgtggcaggcttggttgcggcgggtttatatcctaatccggtgcaaatt
gccgatgttaccactaccacaacccacaaaaccttacgcggtcctcgtggtggtttgatc
cttgccaaagcgaatcctgagattgagaaaaaattgaattcattggtgttcccggggaca
caaggtgggccgttaatgcacgtgatcgcggcaaaagcggtggcatttaaagaggcgatg
gagccggagttcaaaacctatgccgcccaggtaattaaaaacgctcaggcgatggcggaa
gtatttatcgagcgtggcttggatgtggtttcgggtggtactaaaaaccatttgttcctt
gtcagtctgattgaaaaaggcttaaccggtaagctagtcgatgcggccttgggtgctgcg
cacatcacgattaacaaaaactctgtgccgaatgatcctatgtcaccgtttgtcaccagt
ggtattcgtgtcggtaccgcggcggctaccacccgtggttttggtgagcaggaatgtcgt
gatctagctggttggatgtgtgatgtggtggatgcttgtgatcaggcttcggaaagctgg
gatgaaaccgtaattgctcaggttcgccagaaagtcagtgcactttgcgctgcgcaccct
gtttacaagtaa
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