Thiomicrospira microaerophila: JX580_08405
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Entry
JX580_08405 CDS
T08259
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh02020
Two-component system
tmh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JX580_08405
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JX580_08405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tmh02022
]
JX580_08405
02035 Bacterial motility proteins [BR:
tmh02035
]
JX580_08405
Two-component system [BR:
tmh02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
JX580_08405
Bacterial motility proteins [BR:
tmh02035
]
Flagellar system
Flagellar assembly proteins
Others
JX580_08405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA_16
HTH_30
Mg_chelatase
AAA_7
AAA
MCM
AAA_22
AAA_19
AAA_14
nSTAND3
HTH_24
HTH_5
HTH_11
AAA_3
Motif
Other DBs
NCBI-ProteinID:
UQB41689
LinkDB
All DBs
Position
complement(1729032..1730402)
Genome browser
AA seq
456 aa
AA seq
DB search
MSVAKILVVEDDPALQEALVDILTLNELEVTAVSSAEEALVALDDDIAMVFSDIRMDGMD
GYSLMKRIRALKPYLPIVLMTAYGTIEQAVDAMKSGAVDYMVKPFEADVLVQKARAYFNR
DASLDDDFVVADSASVQIKNMANRVAKSTANVMITGESGTGKEVLARYIHQQSDRKDQAF
VAINCAAIPDNMLEAVLFGYEKGAFTGALKSMPGKFEQANKGTIFLDEIGEMRVDLQAKL
LRVLQEREVERIGSLQTISLDIRVISASNINMKQAIAEGRFREDLFYRLNVFPLHLPALR
QRPKDIQHIANKLLIRHSVSSCARPELTECAMARLISHDWPGNIRELDNVIQRALVMITG
DEISASNIIFDDGLASNEASVEVFNGQIKEQRVIESGELTSSDDVTLDLKARETELILSV
LKRNNGHRQKTAEDLNLSPRTLRYKLAKLKDQGIDV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtagctaaaattttagttgttgaagatgatccagctttgcaagaagcgcttgtt
gatattttaactttaaatgaacttgaagtgacagcggtaagctctgcagaagaggcgcta
gttgcgttagatgatgatatcgcaatggttttctctgacatccgtatggatggtatggat
ggctacagtttaatgaaacgtattcgtgccctaaagccttatttaccgattgtgttgatg
actgcttatggaactattgagcaggctgtggatgcgatgaaatcaggtgcggtagactat
atggtgaaaccttttgaagcagatgttttggttcaaaaggcacgggcttattttaaccgc
gatgcttctttggacgatgactttgtggtggctgattcagccagtgtacaaattaaaaat
atggcaaatcgtgttgccaagtcgacagcaaatgtcatgataacgggtgaaagtggtacg
ggtaaagaggtgttggctcgatacatacaccagcagtcggatcgtaaggatcaagcattc
gttgcgataaattgcgccgctattcctgataatatgcttgaggcagtgttatttggctat
gaaaagggtgcatttactggggcgttaaagtctatgccgggcaagtttgagcaggcaaat
aaaggcacgatttttttagatgagattggtgagatgcgagtagatcttcaagccaagttg
ctgagggttttacaagaaagagaggttgaacgcataggttcgttgcaaacgatttcgcta
gatattagagtaattagtgcttccaatattaatatgaagcaggcgattgcagaggggcgt
tttcgtgaggatttattttatcgattaaatgtgtttcccttgcatttgccggcattaaga
cagcgcccgaaggatatacagcatattgccaataagttgttaattagacattctgtttca
agttgcgcaagacctgagctaacggagtgtgcgatggcaagactaatatcacatgattgg
cctggtaatattcgtgagttagacaatgtaattcaacgtgcattggtgatgataacgggc
gatgaaattagcgcttctaatattatatttgatgatgggttagcctctaatgaggcatcg
gttgaggtttttaatgggcaaattaaagagcagcgggttattgaatcaggtgaactaacg
tcttcggacgatgtgacattagacttaaaagccagagagacagagttaattttatcggtt
ctcaagagaaataatggacatcggcaaaaaactgcggaggatctaaacctaagccctaga
acattgcgttataaattagctaagttaaaagaccagggaatagatgtgtaa
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