Thiomicrospira microaerophila: JX580_08805
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Entry
JX580_08805 CDS
T08259
Symbol
rodA
Name
(GenBank) rod shape-determining protein RodA
KO
K05837
peptidoglycan glycosyltransferase [EC:
2.4.99.28
]
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh00550
Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JX580_08805 (rodA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tmh01003
]
JX580_08805 (rodA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tmh01011
]
JX580_08805 (rodA)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tmh03036
]
JX580_08805 (rodA)
Enzymes [BR:
tmh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
JX580_08805 (rodA)
Glycosyltransferases [BR:
tmh01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
JX580_08805 (rodA)
Peptidoglycan biosynthesis and degradation proteins [BR:
tmh01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase
JX580_08805 (rodA)
Chromosome and associated proteins [BR:
tmh03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
JX580_08805 (rodA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FTSW_RODA_SPOVE
HRG
Motif
Other DBs
NCBI-ProteinID:
UQB41762
LinkDB
All DBs
Position
1809133..1810263
Genome browser
AA seq
376 aa
AA seq
DB search
MTNTWLTDKERNYVKPKTWLARIHIDGLLLLGLIMLLITGLITIYSASGGDLNVTKHHAI
RILIAFSLMLAFAQIPPAKLALITPWVFLVGILMLVAVIVFGDMGKGAQRWLDLGFIRFQ
PSEIMKLALPMMVAWLFAYSRYPAHPARFMLGLFIVGLTAGLIVIQPDLGTSILIAMSGL
FVLFFAGLPWKIIVGALFSVAIAIPVVWNFLHAYQKQRVLTFLDPESDPLGAGYHIIQSK
IAIGSGGLEGKGFMGSTQAHLEFLPESTTDFIFSVFAEEFGLIGVILLLTLYSLVLLRGL
YIAYRAQEAFSRLVAASLTMTLFIYVSVNIGMVSGLLPVVGLPLPLISYGGSSMVTLMIS
FGILMSIHTHKKMLSN
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatacgtggctaactgacaaagagcgaaactatgtaaaacccaaaacatggttg
gcaagaattcatattgatggattattactgcttggtttaataatgctgttaatcaccgga
cttatcaccatttatagcgcttctggtggcgacttaaatgtaaccaaacaccatgcaata
agaattttaattgcatttagcctcatgcttgcgtttgcgcagattcctccagccaaactg
gcgttaattacgccttgggtatttttagttggcatcttaatgcttgtcgccgttattgtg
tttggtgatatgggcaaaggcgctcaacgctggcttgaccttggctttatacgatttcaa
ccctctgaaatcatgaaactcgcgctacccatgatggttgcatggttatttgcctacagc
agataccctgcccatcccgcacgatttatgctaggactttttattgtcggcttaacagcg
ggactcattgtgattcaacctgacctgggcacctcaattcttatcgcgatgagcggttta
tttgtgctattttttgctggattaccttggaaaatcatcgttggagcccttttcagtgta
gctatcgccatccctgtcgtctggaactttctccatgcctatcaaaagcaacgtgtgctg
acttttcttgacccggagtctgaccctttgggggctggttaccatatcattcaatcaaaa
atagcgattggatctggtggtttagaaggaaaggggtttatgggcagtactcaggcacat
cttgaatttcttccggaaagtaccacggactttatattttcagtatttgccgaagaattt
gggctcataggcgtcattctgttacttaccctttacagtctggttttgctcagaggttta
tatattgcttatcgcgcccaggaagcctttagtcggttggttgcagccagcttaaccatg
acactctttatctacgttagtgtcaatataggcatggtcagcggacttttacctgtagta
ggactcccattaccactcatcagttacggaggcagctcaatggttaccctaatgatcagc
tttggcatattgatgtcgatccacacccacaaaaaaatgttatcgaattga
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