KEGG   Thiomicrospira microaerophila: JX580_08955
Entry
JX580_08955       CDS       T08259                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
tmh  Thiomicrospira microaerophila
Brite
KEGG Orthology (KO) [BR:tmh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tmh02048]
    JX580_08955
Enzymes [BR:tmh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     JX580_08955
Prokaryotic defense system [BR:tmh02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   JX580_08955
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD PhoH CdiA_CT_tRNase
Other DBs
NCBI-ProteinID: UQB41792
LinkDB
Position
complement(1846183..1849179)
AA seq 998 aa
MKLQFNQNLPHQKAAWEAVVSLFEGQESCSVPFTMPQIQATRPGDSQFGLDYGSDMQLGT
ANRLVLSEEELLDNLKRVQLKHGLKPSKSIHKANLNYTVEMETGTGKTYVYLRSIYELNQ
AYGMTKFIIVVPSIAIKEGVKKSLEITKDHLSLLYKGMNAEAFVYDSGNLEQVRNFAESS
HIQIMVINIQAFSRSFVDPEKEGTANIIHRANDRLEGMRPIELIARTHPVVIIDEPQSVD
TTKKSSEAIQSLNPLFTLRYSATHRDKHLPIYKLDAVDAYNQKLVKQIAVLPVLPEDDNN
NAYIKLVNVQNKKGYCEAQVEYDALTKTGSIKREKKWLKAGADLFELSKRDLYEGYIIKD
ISVEPGNQWMDFTSKEDFLRVGESIGGVDDLALKRLQISKTIEKHLERELVLNPKGIKVL
SLFFIDKVANYRVYDDNGQPGLGVYGQIFEQEFSRLAKHPKYQSLFKEVNLEIAVNQVHD
GYFAADKKGVAKDTNGTTQADDDAYKLIMQDKERLLDLKTPLRFIFSHSALREGWDNPNV
FQICTLNETASTIKKRQEIGRGLRLAVDSTGNRVVDSGFSVNTLTVIANESYHDFTAALQ
KEIEEEDGIKFGVVEDHAFANLVIQQDGKDVTFLGAEDSEKLWLYLKSQELIDKNGKVQD
SLKVALKTDSLVLPEAYQPYQADIQYILKKIAGGLDVKDASKTFSATPKKEVILGADFQA
LWERIKYKTVYQVNFQLDKLIFDCIHAIKHQMVIAKPKFKTGLANVTIDRSGVGVTDVKE
STLIYDAHYQSLPDVLTYLQNKTQLTRKTLARILSESGRLNDFKKNPQMFVERTLEIIQR
QKMHALVDGIKYEKIGDQACYAQELFLEEELKGYLEQNMMAVDKSVYSHIVYDSNIESAF
AKGLEENEAVKLYTKLPGWFKIETPLGNYNPDWAVLVEQDGSERLYFVVETKSSLFSEDL
RQTESDKIKCGIAHFAALGNDVQFVTANSLDGLMNRLG
NT seq 2997 nt   +upstreamnt  +downstreamnt
atgaaacttcaatttaaccaaaatcttccgcatcaaaaagccgcttgggaggcggtggtg
agtttgtttgaagggcaggaaagctgttcagtaccgtttactatgccgcaaattcaagcc
accaggcctggtgacagtcagtttgggttggattatggttcagacatgcagttgggcacg
gccaatcgtttggtgttaagtgaagaggaattattggataacctcaagcgcgtgcagtta
aaacacggcttaaaaccaagtaagtctattcataaagccaatttgaattacacggtggaa
atggaaaccggcacgggcaaaacttatgtgtatttgcgttcgatctatgagttgaaccaa
gcctacggcatgaccaagtttattatcgtggtgccgtcgattgcgattaaagagggcgtg
aaaaagtcgctggaaatcactaaagaccatttgagtttgctctataagggcatgaacgct
gaggcatttgtgtatgattccggcaacttggagcaagtgcgtaactttgccgaatcgagc
catattcagattatggtgattaacattcaggcctttagtcgcagttttgttgatcctgaa
aaagagggcacggcgaacattatccatcgtgcgaacgaccgccttgaaggaatgcgtccg
attgagttgattgcgcgtacccatccggtggtgattattgatgaaccgcaatcggtcgat
accaccaaaaaatccagcgaggcgattcaatcgctcaaccctttgttcaccttgcgttat
tccgccacccatcgcgataaacacttgccgatttataaactcgatgcggtggatgcctat
aaccaaaagctggtgaagcaaatcgcggtattaccggtgttgccggaagacgacaataac
aacgcgtacattaaactggtgaatgtgcagaacaagaaaggctattgtgaggcacaggtg
gaatacgatgccttaaccaaaaccggtagcattaagcgtgaaaagaaatggctcaaagcg
ggtgcggatttgtttgaactgagcaagcgcgatttgtacgaaggttacattattaaagac
atctcggtggagccgggtaatcagtggatggatttcacgtctaaagaagactttttgcgg
gtgggagaaagtatcggcggggtcgatgatctggcgttaaagcgtttgcaaattagcaaa
accattgagaagcatctagaacgcgagctggtattgaacccgaaaggcattaaggtgttg
agcctgttctttattgacaaggtggcaaattatcgtgtttacgatgacaacggacaacca
ggcctgggtgtgtatggacagatatttgagcaggagtttagccgtttagccaagcatccg
aaatatcagtcgttgtttaaagaagtgaatttggagattgccgttaatcaggtgcatgac
ggttattttgccgctgataagaaaggcgtggcgaaagacaccaacggcaccacccaagcc
gatgatgatgcctataaattgattatgcaggacaaagaacgcttgctggatttaaaaacg
ccattgcgttttattttctcgcattcggccttgcgcgaaggctgggataacccaaatgtg
tttcagatttgtaccctgaatgaaaccgcctcaacgatcaaaaagcgccaagagattggg
cgcggtttgcgcctagcggtcgatagcacgggtaatcgcgtggtggacagcggcttttca
gtaaacacgctaacggtaattgccaacgagtcgtatcacgattttactgctgcgttgcaa
aaagagatcgaagaggaggacggcattaagttcggcgtggtcgaagatcatgcgtttgcg
aacttggtgattcagcaagacggtaaggatgtgacctttttgggcgcagaagactcggaa
aaactctggctttatctgaaatcgcaagaattgatcgataaaaacggcaaggtgcaagac
agcttaaaagtcgcgttgaaaaccgatagcttggtgctgccggaggcctatcagccttat
caagcggatattcagtatattctgaagaaaattgccggtggcttggatgtcaaagatgcg
agcaaaacctttagcgcaaccccgaaaaaagaagtgattttgggggcggattttcaggcc
ttgtgggagcggattaaatacaaaaccgtgtatcaggtgaactttcaactggataagctg
atttttgattgcattcacgcgattaaacatcaaatggtgattgccaagccgaaatttaaa
accggcttggcaaatgtgacgattgatcgcagtggcgttggggtgacggatgtgaaggaa
tcgaccttgatttacgacgcccactatcaaagcctgccggatgtgttgacctatctgcaa
aacaaaacccaactcacgcgtaaaacgctggcgcggattttgagcgaaagcggacggtta
aatgactttaaaaagaatccgcagatgtttgttgagcgcacgttagagattattcagcgc
caaaaaatgcacgcgttggtggatggcattaaatacgaaaaaatcggcgaccaggcctgc
tatgcacaagaattgttcttggaagaggagttgaaaggctatcttgagcaaaatatgatg
gcggtggacaagagcgtgtatagccatattgtctatgactcaaacattgaatcggcgttt
gcgaaagggctggaagaaaacgaggcggtgaagctttataccaaattgcccggctggttt
aagattgaaaccccgttaggaaattacaacccggattgggcggtgttggttgaacaagat
ggtagcgaacgcttgtattttgtggttgaaaccaaaagcagtttgtttagcgaagattta
cgccaaaccgaaagcgacaagatcaaatgcggtattgcccattttgcagcattggggaat
gatgttcaatttgttaccgcgaatagccttgatggattaatgaataggttgggataa

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