Thiomicrospira microaerophila: JX580_09395
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Entry
JX580_09395 CDS
T08259
Name
(GenBank) deoxyribodipyrimidine photo-lyase/cryptochrome family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tmh
Thiomicrospira microaerophila
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmh03400
]
JX580_09395
Enzymes [BR:
tmh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JX580_09395
DNA repair and recombination proteins [BR:
tmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JX580_09395
Prokaryotic type
JX580_09395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UQB41872
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Position
complement(1942664..1944217)
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AA seq
517 aa
AA seq
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MEKTSIQIVWFKRDLRIHDHAPLYFAAQQGAVLPVYVFEPDLWQQPDASLRQWRFVADCL
LDLDADLRALGQGLVFAVGEVTDVFAQLQQDYQISAIWSHQETGNAWSYQRDKQVKGWLQ
DQQIPWYELAQHPIKRGLVQRDHWQAQADQFFQQALIPTPASLPGLLMAPPLSANGLAQQ
LEYHLPAPIVADEHTQPGGRRRGEQRLADFLQRHLSRYLYDIAKPLASRQSSSRLSPHLA
WGCLSIREVMQAAYGARGRLGEKNDRALNAFVSRLHWQSHFMQKLETEPALEFSCLQAET
EGLRSQGQYPTRLQAWFEGQTGVPLVDACMRCLRHTGWLPFRMRAMVMSFASYQLWLDWR
DTAPLLARLFTDYEPGIHYSQVQMQSGTTGINAMRVYNPVKQSQDHDPEGRFIKQWCPEL
AGLEAAFIHAPWDAAPEWLAQAGLVLGQNYPWPIVDLEQSAREAKQQLAALRKQPSARAQ
AQQVYVKHGSRLRPASRRRSKKTVATLEVDSPQLSLF
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacttcaattcaaatagtatggtttaagcgtgatttgcgtatccatgatcat
gcgccgctgtattttgccgcccagcagggcgcggtcttacctgtctatgttttcgagcca
gatctttggcaacagccggatgccagtttgcgccaatggcgatttgtcgcggattgtttg
ctggacttagacgcagacttacgtgcgttggggcaaggcttggtgtttgcggttggcgag
gtgaccgacgtttttgcgcaactccagcaggattatcagatcagtgcgatctggtcgcat
caagaaaccggtaatgcctggagctatcaacgcgataagcaggttaaaggttggttacaa
gatcaacagattccttggtatgaattagcccagcatccgattaaacgtggccttgtacaa
cgagatcattggcaggctcaagccgaccagttttttcaacaagccttaatccccacacct
gccagcttaccaggcctgctgatggcgccgccattaagtgccaacgggctggcccaacag
cttgaataccatttgcctgcaccgattgtggccgatgagcacacccagccgggcggccgg
cgacgcggcgagcagcgcttggccgattttctgcagcgccatctatcgcgttatttgtat
gacattgccaagccgttggcttcacggcaatccagttcacggctcagcccacatttagct
tggggttgtctgtcgattcgtgaggtgatgcaagcggcctatggcgcgcgtggcaggctg
ggcgaaaaaaatgaccgtgctttgaatgctttcgtttcacgccttcactggcaaagtcat
tttatgcaaaaactggaaaccgaaccggcgctggaatttagctgtttgcaagctgaaacc
gaggggttgcgtagccaaggtcagtatccgacacgtttgcaggcctggttcgaggggcaa
actggcgtgccgttggttgatgcctgtatgcgttgcttgcgccataccggttggttaccg
tttcggatgcgggcgatggtaatgagttttgccagttatcagctttggctagattggcgc
gatacggcgccattgctggcgcgtttgtttacggattatgaaccgggcattcattactcg
caggtgcaaatgcaatccggcaccaccgggattaatgcgatgcgggtgtataacccggtt
aagcagtcacaagaccatgaccctgaaggacgctttatcaagcagtggtgtcctgaactg
gctggtttagaggccgcgtttattcatgcaccttgggatgccgcaccggaatggttggcg
caagcaggcctggtattgggacaaaattatccctggccgattgtggatcttgagcagtca
gcgcgtgaggccaaacaacagctggccgcgttacgcaagcaaccgagtgctcgcgcacaa
gcgcagcaggtttatgttaagcatggtagccgcttgcgtccggctagtcggcgtaggtct
aaaaaaaccgtcgccacccttgaggttgatagcccacaattgagtttgttttaa
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