KEGG   Thiomicrospira microaerophila: JX580_09975
Entry
JX580_09975       CDS       T08259                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
tmh  Thiomicrospira microaerophila
Pathway
tmh00300  Lysine biosynthesis
tmh00470  D-Amino acid metabolism
tmh01100  Metabolic pathways
tmh01110  Biosynthesis of secondary metabolites
tmh01120  Microbial metabolism in diverse environments
tmh01230  Biosynthesis of amino acids
Module
tmh_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:tmh00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    JX580_09975 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    JX580_09975 (lysA)
Enzymes [BR:tmh01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     JX580_09975 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N Aminotran_3 DUF1955
Other DBs
NCBI-ProteinID: UQB41980
LinkDB
Position
2058919..2060169
AA seq 416 aa
MTAAFHYQNNQLFTEQVCVTELAQQYGTPLYVYSRTELESRWQDFDQAFGNQPHLVCYAV
KTNSNLAVLQTLAKLGSGFDIVSQGELERVLRAGGEPSKVVFSGVAKKEVEIERALDVGI
RCFNLESHAELQRIQTVAQRMDKIAPISIRVNPDVDAKTHPYISTGLKENKFGVDIQTAP
ALYQQALACSHIKIIGIDCHIGSQLTEIAPFVDALKKVLQLKQQLSEQGIEIHHLDLGGG
LGIRYTDQTPPAIADYIQALLNQLNDPTVEVIIEPGRAIAGNAGILVTEVEYLKPTEHKH
FAIIDAAMNDLIRPALYQAYQNIIAVAPRNDGVDASWDLVGPVCETGDFLGKDRTLNLKA
GDLLAVMSAGAYGFTMSSNYNTRPRAAEIMVQGNQAWLVRPRETYEDLMGSERLID
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgaccgccgcatttcattatcaaaataaccaactttttaccgaacaggtttgcgtcacc
gaactggctcaacaatacggcaccccgctttatgtttattctcgcaccgaattagaaagc
cgctggcaggattttgatcaggccttcggcaaccaaccccatcttgtgtgctatgcggtt
aaaaccaattcaaacttggccgtgctgcaaaccctcgccaaactcggttcaggctttgat
atcgtatcgcaaggcgaattagagcgggtactgcgcgctggcggtgagccaagcaaagta
gtgttttcgggtgtagcgaaaaaggaagtcgaaatcgaacgcgccttggatgtcggcatt
cgttgctttaacctagagtcccacgccgaactacaacgcatccaaacggttgcgcaacgg
atggataagatcgcgccgatttctattcgcgtcaatcccgatgtcgatgccaaaacgcac
ccttatatttctaccggcctcaaagaaaataagtttggtgtcgatattcaaaccgccccc
gcactctatcaacaagccctagcctgttcacatattaaaattatcggcatcgattgccat
attggttcacagcttaccgagattgccccgtttgtcgatgcgctgaaaaaagtgctgcaa
cttaaacagcagcttagcgaacagggtattgagattcaccatcttgatttaggcggcggc
ttaggcattcgctacaccgaccaaaccccgcctgcgattgctgattatatccaagccttg
ctgaaccaacttaacgacccaactgtcgaggtaattatcgaacccggtcgtgcgattgcg
ggtaatgccggcattttggttaccgaagtcgaatacctcaaacccaccgaacacaaacac
tttgcgattattgatgccgccatgaacgacttaatccgcccggcgctttaccaagcctat
caaaacattattgcggtagcaccacgcaatgacggcgtcgatgccagctgggatttagtc
ggcccggtgtgtgaaaccggtgattttttaggcaaggatcgcacgctaaatttaaaagcc
ggtgatttactcgcggtgatgtcagccggagcctatggatttaccatgagctcgaactac
aacacccgaccgcgtgcggcagaaatcatggtgcaaggcaaccaggcctggttggtacgc
ccgcgggaaacctatgaagatttaatgggctcagaacgcttaattgactaa

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