Thiomicrospira microaerophila: JX580_09975
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Entry
JX580_09975 CDS
T08259
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh00300
Lysine biosynthesis
tmh00470
D-Amino acid metabolism
tmh01100
Metabolic pathways
tmh01110
Biosynthesis of secondary metabolites
tmh01120
Microbial metabolism in diverse environments
tmh01230
Biosynthesis of amino acids
Module
tmh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JX580_09975 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JX580_09975 (lysA)
Enzymes [BR:
tmh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JX580_09975 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Aminotran_3
DUF1955
Motif
Other DBs
NCBI-ProteinID:
UQB41980
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All DBs
Position
2058919..2060169
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AA seq
416 aa
AA seq
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MTAAFHYQNNQLFTEQVCVTELAQQYGTPLYVYSRTELESRWQDFDQAFGNQPHLVCYAV
KTNSNLAVLQTLAKLGSGFDIVSQGELERVLRAGGEPSKVVFSGVAKKEVEIERALDVGI
RCFNLESHAELQRIQTVAQRMDKIAPISIRVNPDVDAKTHPYISTGLKENKFGVDIQTAP
ALYQQALACSHIKIIGIDCHIGSQLTEIAPFVDALKKVLQLKQQLSEQGIEIHHLDLGGG
LGIRYTDQTPPAIADYIQALLNQLNDPTVEVIIEPGRAIAGNAGILVTEVEYLKPTEHKH
FAIIDAAMNDLIRPALYQAYQNIIAVAPRNDGVDASWDLVGPVCETGDFLGKDRTLNLKA
GDLLAVMSAGAYGFTMSSNYNTRPRAAEIMVQGNQAWLVRPRETYEDLMGSERLID
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgcatttcattatcaaaataaccaactttttaccgaacaggtttgcgtcacc
gaactggctcaacaatacggcaccccgctttatgtttattctcgcaccgaattagaaagc
cgctggcaggattttgatcaggccttcggcaaccaaccccatcttgtgtgctatgcggtt
aaaaccaattcaaacttggccgtgctgcaaaccctcgccaaactcggttcaggctttgat
atcgtatcgcaaggcgaattagagcgggtactgcgcgctggcggtgagccaagcaaagta
gtgttttcgggtgtagcgaaaaaggaagtcgaaatcgaacgcgccttggatgtcggcatt
cgttgctttaacctagagtcccacgccgaactacaacgcatccaaacggttgcgcaacgg
atggataagatcgcgccgatttctattcgcgtcaatcccgatgtcgatgccaaaacgcac
ccttatatttctaccggcctcaaagaaaataagtttggtgtcgatattcaaaccgccccc
gcactctatcaacaagccctagcctgttcacatattaaaattatcggcatcgattgccat
attggttcacagcttaccgagattgccccgtttgtcgatgcgctgaaaaaagtgctgcaa
cttaaacagcagcttagcgaacagggtattgagattcaccatcttgatttaggcggcggc
ttaggcattcgctacaccgaccaaaccccgcctgcgattgctgattatatccaagccttg
ctgaaccaacttaacgacccaactgtcgaggtaattatcgaacccggtcgtgcgattgcg
ggtaatgccggcattttggttaccgaagtcgaatacctcaaacccaccgaacacaaacac
tttgcgattattgatgccgccatgaacgacttaatccgcccggcgctttaccaagcctat
caaaacattattgcggtagcaccacgcaatgacggcgtcgatgccagctgggatttagtc
ggcccggtgtgtgaaaccggtgattttttaggcaaggatcgcacgctaaatttaaaagcc
ggtgatttactcgcggtgatgtcagccggagcctatggatttaccatgagctcgaactac
aacacccgaccgcgtgcggcagaaatcatggtgcaaggcaaccaggcctggttggtacgc
ccgcgggaaacctatgaagatttaatgggctcagaacgcttaattgactaa
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