Thiomicrospira microaerophila: JX580_10475
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Entry
JX580_10475 CDS
T08259
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
tmh
Thiomicrospira microaerophila
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmh03021
]
JX580_10475 (rpoH)
Transcription machinery [BR:
tmh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JX580_10475 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
UCR_14kD
GntR
Motif
Other DBs
NCBI-ProteinID:
UQB42071
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Position
2143858..2144721
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AA seq
287 aa
AA seq
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MASTALTIQQLTPGQNLESYLRTVRTLPQLNAEEERELAERLYYHQDLEAARQLILASLR
YVVPVARSFNGYGLPLGDLIQEGNIGLMKAVKRFNPEEGVRLMTFAVHWIRAEINEFVIK
NWRIVKTATTKAQRKLFFKLRGAKNALEWFSDKDADRVAEELGVTRADVLEMDSRLYGKD
IQVDMTADEEDERGYHAPVLISHELDPETHWVRETEDQRQTELMQSALQQLDPRSLDIIQ
ARWLGENKLGLKELSEKYGVSMERIRQIEQQAMKKLKASLSESLLLA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacagcgcttacaattcaacagcttacaccagggcaaaacctagaaagctat
ttacgcactgttcgcacgcttcctcaactgaatgcagaggaagaacgagaactggctgaa
cgtctttattaccaccaagaccttgaagccgcccgtcaactgattctggcatcgctgcgt
tatgtcgttccagtggcgcgaagcttcaatggctatggcttaccgctcggcgatttaatt
caagaaggcaatatcggtttaatgaaggcggtcaagcgctttaacccagaagagggcgtg
cgcctgatgacgtttgcggtgcactggattcgtgccgagattaacgaatttgtaattaaa
aactggcgcatagttaaaaccgcgaccaccaaagcacagcgtaaattattctttaaactg
cgtggtgccaaaaatgcactcgagtggttcagcgataaagatgcggatcgcgtcgcagaa
gagctgggggtaacccgtgccgatgtactggaaatggacagccgattatacggcaaagac
attcaggttgacatgaccgctgatgaagaagatgaacgcggctatcatgcaccggtatta
attagtcatgagcttgatcctgaaacccattgggtacgtgaaacagaagaccagcgtcaa
actgaactcatgcaatccgcactgcaacagcttgacccgcgaagcttggatattatccaa
gctcgctggttaggtgaaaataaactgggcttgaaagagctatcagaaaagtatggcgta
tcgatggaacgcattcgtcaaatagagcagcaagcaatgaaaaaactcaaggcctctctg
agcgaaagccttttgctggcctag
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