Thermotoga maritima MSB8: THEMA_00355
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Entry
THEMA_00355 CDS
T02976
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tmi
Thermotoga maritima MSB8
Brite
KEGG Orthology (KO) [BR:
tmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmi03016
]
THEMA_00355
Enzymes [BR:
tmi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
THEMA_00355
Transfer RNA biogenesis [BR:
tmi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THEMA_00355
Prokaryotic type
THEMA_00355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
PUA
TruB_C_2
PUA_3
DKCLD
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AHD17391
UniProt:
Q9WZW0
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(63665..64594)
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AA seq
309 aa
AA seq
DB search
MKHGILVAYKPKGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFY
KDLKKVYWVKMRLGLITETFDITGEVVEERECNVTEEEIREAIFSFVGEYDQVPPAYSAK
KYKGERLYKLAREGKIINLPPKRVKIFKIWDVNIEGRDVSFRVEVSPGTYIRSLCMDIGY
KLGCGATAVELVRESVGPHTIEESLNVFEAAPEEIENRIIPLEKCLEWLPRVVVHQESTK
MILNGSQIHLEMLKEWDGFKKGEVVRVFNEEGRLLALAEAERNSSFLETLRKHERNERVL
TLRKVFNTR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacggaatccttgtagcttacaagcctaaaggacccacatcgcacgatgttgtg
gacgaagttagaaaaaaattgaagacgaggaaagtcggacacggaggaactctcgatccg
ttcgcctgtggggttctcataatcggtgtcaaccagggcacgagaattctcgagttctac
aaggatttgaaaaaggtgtactgggtgaagatgaggcttggtttgataaccgagactttc
gatataacaggcgaagttgtcgaagaacgagagtgcaacgtcaccgaagaagaaataaga
gaagcaatcttttcctttgtgggagaatacgaccaagttccaccagcttattctgctaaa
aaatacaaaggcgaacgtctctacaaactggcgagagagggaaagatcataaatcttcca
ccaaagcgagtgaagatcttcaagatatgggacgtgaatattgagggaagagacgtctct
ttcagagtggaagtgtctcctggtacctacataagatctctctgtatggatataggttac
aagctcggttgcggtgccaccgctgttgagcttgtaagggagagcgtgggacctcataca
atcgaggaaagtttgaacgtattcgaagccgctcctgaagagatcgaaaacaggatcata
ccactcgaaaaatgccttgagtggctgccgcgtgttgtcgttcatcaggaatcaacgaaa
atgattctcaacggttctcaaatacaccttgagatgctcaaagaatgggacggtttcaaa
aagggtgaagttgtcagagtattcaacgaagaaggacggttacttgctctggctgaagcg
gaaagaaattcttcgtttctggaaaccttgagaaagcacgaaagaaacgagcgagttttg
accctcagaaaggtcttcaacacgaggtga
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