| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
tmi Thermotoga maritima MSB8
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:tmi00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
THEMA_02395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:tmi03021]
THEMA_02395
03400 DNA repair and recombination proteins [BR:tmi03400]
THEMA_02395
Enzymes [BR:tmi01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
THEMA_02395
Transcription machinery [BR:tmi03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
THEMA_02395
DNA repair and recombination proteins [BR:tmi03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
THEMA_02395
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(458344..463416)
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| AA seq |
1690 aa
MPMSSFKRKIKAIQIKIASPEVIRSWSGGEVKKPETINYRTFKPERDGLFCERIFGPVKD
YECACGKYKGKKYEGTVCERCGVRVESREARRKRMGHIELAAPAVHIWYLESIPSVLGTL
LNMSTSDLENIIYYGSRRVIERAFIVTDPKDTPFSQGDVIYETEYRIYRKKWDFDVEQAF
VVKNPKSPVLSDIDGEVTLKTEKSITGREITWIIVKNITRATHTVLPGMILVVKDGQEVE
KGQDLTKEMTIDPVYAPFDGHVEIDELSNTITLKPLTTSKDQPVVFTIPYGAKILVSNGQ
KVKKGDQITTSTSLPAVKASISGTVRFGSNLNIRALEDGNFEVLSTGEVYVEQVIEERKY
PVFEGALVYVNNGDQVKKGDHLADRFLFEEEYLSATEYKIFESHYPTMFDVEERTENDRP
IVVITDIDPEVSKETGLKVGDIVTENEYEAYLQIYPEKIVADAGAQAIKKLLQNLDLEAL
QAEIEAELKKLPSSSSKAIKLRRRLKMVKDFLKSGNKPEWMVLEVVPVIPPDLRPMIQIE
GGRFATTDLNELYRRLINRNNRLKKLLELGAPEIILRNEKRMLQEAVDALIHNGSDSEGK
RSRRAVLKDRNGRPLKSLTDLLKGKKGRFRRNLLGKRVDYSGRAVIVVGPNLKIHQCGIP
KKMAMELFKPFVLAKLLGEGSSSKTMRKVKKAIIEKEMPEAWEVLEEVIKGSVVLLNRAP
TLHRMSIQAFEPKLVEGNAIQLHPVVCPPFNADFDGDQMAVHVPLSAAAQAEARFLMLSR
YNIISPAHGKPISLPTQDIIIGSYYLTTVGKEFDSLKEEDVKWKFSSPEEAMLAYHLGFI
KLHTPILIKVAVNGEEKRIKTTLGRVIFNGILPEDLRDYNRIFDKKQINALVYETFKRHG
IDRAADLLDDIKDIGFHYATVSGLTLSLKDLKIPPERDEILRKTWEKVRIIEENYEKGFL
TEEQRKSEIIRLWMSVTEEITKLTSKTLAEDPFNPIYMMVNSGARGNIDQVKQLAGIRGL
MIKAYDPRSREIKSKIFKGQAIHEALTFDYPVDKNLREGVDILQFFISTYGARKGQVDTA
MNTSFAGYLTRRLVDVAQSVTVAEPDCGTHEGIRAMDLIKEGTVVEKMNEFLFGRVLARD
VLDPETKEVLKNPETGKEYTRNTMLTDDDANFLASYKKMVDVVRYEEIDITELSLPNMYA
EIAEPVGEYEEGTELTWDVIKAAKNEGKYRIKVKVYPVVGTVYAEEEPLYDKKGERQLLV
YQEVINEIVAKMLEENGIEKVSVRPDIIVRSPLTCESEYGVCAACYGMDLSNHKIVNVGE
AVGVVAAQSIGEPGTQLTMRTFHVGGVMGASDIVSGLTTVEKTFEPYAFLREEKSGGKKE
IRKYYGSEAILCEVDGFVKDIATDESGRTVIYIEDYAGNIHAYKVPKRAKVRVEKGQKVL
RGETLTSGAIVWWKLLELESEKGVMTAMNLLKIIKNAYVQQGVSIHDKHFEIIFKQMLSM
ATIVDPGDSDYLPDQLVPLVDIKRFNREILEGNAKVEENRKWVIGKTLAKRIITETEEGE
LVELAQKGDEVTEELLKKIIEAGIKEIDVFEKDKVVTYQILPKEPIKYKRRLLSLKKAAL
NYPGWLSAAAFEETAWVLTAAAIEGKVDPLIGLKENVIVGQLIPAGTGLDVFAGIQVEET
PRAAVEEELA |
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| NT seq |
5073 nt +upstreamnt +downstreamnt
atgccaatgtcctctttcaagaggaagataaaggcaattcagataaagatagcctctccg
gaagtgataagaagctggtctggaggagaggtcaagaaaccagaaacgatcaactacagg
acattcaagcccgagagagacggccttttctgtgagaggatttttggtcctgtgaaggac
tacgaatgtgcctgtggtaagtacaaggggaagaaatacgaaggtaccgtctgtgaaagg
tgtggagtcagggtcgaatccagagaagccagaagaaaaagaatgggacacatagaactg
gcagcacccgctgtgcacatctggtatctcgagagcataccgagtgttctcggaacactc
ttgaacatgagcacttcagacctggaaaacatcatctactacggcagtcgccgtgtcata
gaaagagcttttattgtgactgatcccaaagatactccgttctcccagggggatgtgatc
tacgagaccgagtacaggatatacagaaaaaagtgggatttcgatgttgaacaggcgttt
gtggtgaagaatccaaaatctcctgttctttccgatatcgatggagaagtgactttgaag
acagaaaagtccatcacaggaagggaaatcacctggatcattgtgaagaacatcaccaga
gccacacacacggtgctccctggaatgattctcgttgtgaaagatggccaagaagtggaa
aaaggacaggatctgacaaaagaaatgacaatcgaccctgtttacgctccgtttgacggt
cacgtggaaatagatgaactttcgaatactattacgttgaaacctctcacaaccagtaag
gatcagccggttgttttcacgattccttatggagcgaagattcttgtttcgaacggccag
aaggtgaaaaaaggtgatcagatcacgacttctaccagcctcccagccgtcaaagcgagc
atatctggtacagtgagatttggttccaacctcaacataagagcacttgaagacggaaac
ttcgaagtcctttccaccggtgaagtctatgtagaacaggttatagaggagagaaaatat
cctgtctttgaaggagcgcttgtctacgttaacaacggcgaccaggtgaagaaaggagat
cacctggctgacagattcctcttcgaggaagaatacctctctgccaccgagtacaaaatc
ttcgagtcgcactatccaaccatgttcgatgttgaagagagaacggaaaacgacagaccg
attgtggtcataacggatatagatcccgaggtttccaaagaaacgggtttgaaggttggc
gatatagtcacagaaaacgagtacgaagcataccttcagatctatccagaaaagatagtg
gctgatgccggggcacaggcgataaagaaactgcttcagaatctggatctggaagcgctt
caggcagaaattgaagcggaactcaaaaagttaccttcttccagctcgaaggcgataaag
ctcagaagaaggttgaagatggtaaaggatttcctgaaatctggtaacaaacccgaatgg
atggttcttgaggttgttcctgtgattccacccgacctcaggccgatgatacagatcgag
ggaggaaggttcgccacaacagacctcaacgaactttacagaagactcataaacagaaac
aacagactcaaaaagcttctggagctcggggcacctgagatcattctgagaaacgagaaa
agaatgcttcaagaagcggttgacgctctcattcacaacggttctgattcggaaggaaag
agaagcagaagagccgttttgaaagatagaaacggtaggcctctgaaatcgctcaccgat
ctactgaaaggaaagaaaggaagattcagaaggaacctgcttggaaagcgtgtggattac
tctggaagagcggttattgtcgtgggcccaaatctgaagatacaccagtgcggtattcca
aagaaaatggcaatggagctcttcaaaccgtttgttctggcgaaactccttggagagggt
tcttccagcaaaaccatgagaaaggtcaagaaagcgatcatagaaaaagagatgccggaa
gcctgggaagtgcttgaagaagtgataaagggaagcgtcgttcttttgaacagagctccc
acactccacaggatgtcaattcaggcgtttgaaccaaaactcgttgaaggaaacgccata
cagctccatcctgtcgtgtgtccaccattcaacgcggattttgacggtgaccagatggcg
gttcatgtaccgctttcggccgcggcgcaggcagaggcaagatttctcatgctttcgaga
tacaacatcatctccccagcacacgggaagccgatttcgctgccgacgcaggatatcatc
ataggttcttactacctcacaacagttggtaaagaattcgactcactgaaagaagaagat
gtgaaatggaagttctcttcgcccgaagaggcgatgctggcttaccaccttggattcata
aaacttcacactccgattctgataaaggttgctgtcaacggcgaggaaaaacgaataaag
acgactctgggaagagtgatcttcaacggcattctcccggaagatttgagggattacaat
agaattttcgacaaaaaacagataaacgctctcgtctatgaaacgttcaagagacacggt
atagacagagctgcggatctcttggatgacataaaagacatcggtttccactacgcaacc
gtttccggtctgactctctcgttgaaagatctgaagataccaccagagagagatgagatt
ctcaggaagacctgggagaaggtcagaataatcgaagagaattacgaaaagggcttcctg
acggaggaacagagaaagagtgaaatcatacgactctggatgagtgtgacggaggagatc
acaaaactcacatccaaaacgctcgcagaggatccgttcaaccccatatacatgatggtg
aactctggtgctagaggtaacatagatcaggtgaaacagctcgccggtatcagaggtttg
atgatcaaggcgtacgacccaagatccagggaaataaagtccaagatcttcaagggtcag
gcgatccacgaagcactcacattcgattacccggtcgataagaacctcagagaaggtgtt
gacatcctgcagttcttcatttccacctacggtgccagaaaaggacaggttgacacagca
atgaacacatcctttgcgggatatctgacgaggcgtcttgtggatgtagcccagagcgtt
acagtggcggaacccgactgtggaacacatgagggaatcagagccatggatctgataaaa
gaaggaacagtcgtggaaaagatgaacgagttcctcttcggtagagtgctcgcaagggac
gtgcttgatccagaaacaaaagaagttttaaagaatccagaaacgggcaaggaatacacg
agaaacaccatgctcacagacgacgatgcgaacttcctggcttcttacaagaaaatggtt
gacgttgtgaggtacgaagagatagacataacagaactctcactccccaacatgtacgcc
gagatagcagaacccgttggagagtacgaagaaggaacggaactcacctgggatgtgata
aaagctgctaagaacgaagggaaataccgcataaaggtgaaggtctatcctgtcgttgga
actgtttacgcggaagaggaacctttgtacgataaaaaaggtgaaagacagcttctcgtg
taccaggaagtgataaacgagatcgtggcgaagatgctcgaagaaaatggaatagaaaaa
gtttccgtgagacccgatatcattgtgagatcgcctctcacctgtgagtccgagtacggc
gtctgcgctgcctgttacggtatggatctttccaaccacaagatagtgaacgtcggagaa
gcggtgggagttgtggccgctcagtccataggagagcccggcacacagctcacgatgaga
acattccacgttggaggagtcatgggtgcgagcgacatcgtcagcggtctcacaactgtg
gagaagacgttcgaaccgtacgcgttcttgagagaagaaaagagcggtggaaagaaagaa
atcagaaaatactatggatccgaagccattctgtgtgaggtcgatggtttcgttaaagac
atagcaaccgatgaaagtggtagaacggtgatttacatcgaggattacgccggtaacatc
cacgcttacaaagtaccgaagagagcgaaagtaagggtagaaaaaggccagaaagtcctg
agaggagaaaccctcaccagcggcgccattgtgtggtggaaactcctggagctcgaatca
gaaaaaggtgtaatgacggcgatgaatctgctgaagatcataaagaacgcctacgtccag
cagggtgtgagtatacacgacaagcacttcgagatcatattcaaacagatgctaagcatg
gcaacgatcgtcgatcctggagacagcgattacttgccggatcaacttgtgccgcttgtg
gatataaagagattcaacagggaaatcctcgaaggaaatgcgaaagtggaagagaacagg
aagtgggtcataggaaagacgctcgcgaagaggatcatcacggaaacagaagagggagaa
ctcgtggaactcgcgcaaaaaggcgatgaagtgaccgaggaacttttgaagaagatcata
gaagcgggaataaaagagatcgacgtcttcgaaaaagataaagttgtgacgtaccagatt
ctcccgaaggaacctatcaagtacaagagaagactcctgtcgctcaagaaagcggctctt
aactaccccggctggctcagcgcggctgcgttcgaagaaactgcgtgggtgttgaccgca
gcggcgatcgaaggaaaggtcgatccgctcattggattgaaggaaaacgtgatcgttggt
cagctgatacccgcaggaaccggtctcgatgtcttcgcgggaatccaggtggaagaaacc
ccaagggctgcagtggaagaagaactcgcgtga |
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