Telluria mixta: P0M04_10405
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Entry
P0M04_10405 CDS
T08884
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tmj
Telluria mixta
Brite
KEGG Orthology (KO) [BR:
tmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmj03032
]
P0M04_10405 (gyrB)
03400 DNA repair and recombination proteins [BR:
tmj03400
]
P0M04_10405 (gyrB)
Enzymes [BR:
tmj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
P0M04_10405 (gyrB)
DNA replication proteins [BR:
tmj03032
]
Prokaryotic type
DNA Topoisomerases
P0M04_10405 (gyrB)
DNA repair and recombination proteins [BR:
tmj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P0M04_10405 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WEM98104
LinkDB
All DBs
Position
complement(2342001..2344505)
Genome browser
AA seq
834 aa
AA seq
DB search
MSENTQAVLESSPAKAEEYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDN
SIDEALAGYCTEIHVTIHSDNSVSITDNGRGIPTGIKMDDKHEPKRSATEIALTELHAGG
KFNQNAYKVSGGLHGVGVSCVNALSKLLRVTVRQNGKVHQMEFERGVPLNREIEIRDGFE
VSPIKVIGETDKRGTEVHFWADEEIFSHVEFHYEILSKRIRELSFLNNGVNIKLSDQRTG
KEEIFAFEGGTRGFVEYINKAKTVLHPTVFQATGERVSENGTNVSVDVSMQWNDAYNEQV
LCFTNNIPQRDGGTHLTGLRAAMTRVINKYIDENDFAKKAKVEISGDDMREGLTCVLSVK
VPEPKFSSQTKDKLVSSEVRGPVEEIVAKTLTDFLMEKPNDAKIICGKIVEAARAREAAR
KARDLTRRKGVMDGLGLSSKLADCQERDPALAELYIVEGDSAGGSAKQGRDRKFQAILPL
RGKVLNVEKARFEKMLSSEQITTLIATLGTSIGPDEFNVDKLRYHRIIIMTDADVDGAHI
RTLLLTLFYRQMPQLVERGHIYIAQPPLYKVKAGRDERYLKDDVEEASYMMRFALNGAAL
LPKEGAEAITDGALGDLVDKYNKANAIMMRLSRVIDRAALSAIMTGVKLDLSTQEAAEKS
AQAMADAIHDPSVKVGVRSDELSDKHSLRIERIHYGNVQVTSIDADFVASADYKTLENSA
ETFQGLMGDGAIIRRGEGEKMKEFAVRDFQQAMEWLREEAERGVSKQRYKGLGEMNPEQL
WETTMDPTVRRLLKVQIEDAIAADQIFTTLMGDEVEPRRNFIESNALQAGNIDV
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaacactcaagcagttttggaatcctcccctgccaaggcggaagagtacggc
gcctcgtcgatccagatcctggaaggcctggaagcggtacgcaagcgtccgggcatgtac
atcggcgacacgtcggacggcaccggcctgcatcacctggtgttcgaggtgctcgataac
tcgatcgacgaggccctggctggctactgcaccgaaatccacgtcacgatccattccgac
aattcggtctcgatcaccgacaacggccgcggcatcccgaccggcatcaagatggacgac
aagcacgagccgaaacgctcggcgaccgagatcgccctgacggaactgcacgccggcggc
aaattcaaccagaacgcctataaagtgtcgggcggcctgcacggcgtcggcgtctcgtgc
gtgaacgcgctgtcgaagctgctgcgcgtgaccgtccgccagaacggcaaagtgcaccag
atggaattcgagcgcggcgttccgctgaaccgcgaaatcgaaatccgcgacggcttcgaa
gtctcgccgatcaaggtcatcggcgaaaccgacaagcgcggcacggaagtccatttctgg
gccgacgaggaaatcttctcgcacgtcgagttccattacgagatcctgagcaagcgtatc
cgcgaactctcgttcctgaacaacggcgtcaacatcaagctgagcgaccagcgcaccggc
aaggaagaaatcttcgccttcgaaggtggcacccgcggcttcgtggagtacatcaacaag
gccaagaccgtcctgcacccgaccgtgttccaggcgacgggcgagcgcgtgtcggaaaac
ggcaccaacgtctcggtcgacgtgtcgatgcagtggaacgacgcgtacaacgagcaagtg
ctctgcttcacgaacaacatcccgcagcgcgacggcggcacccacctgaccggcctgcgc
gcggcaatgacgcgcgtgatcaacaaatacatcgacgagaacgacttcgccaagaaggcc
aaggtcgaaatctcgggcgacgacatgcgcgaaggtctcacctgcgtgctgtcggtgaaa
gtgcctgagccgaagttctcgtcgcaaacgaaagacaagctcgtgtcgtcggaagtgcgc
ggcccggtcgaagagatcgtggcgaagacgctcaccgacttcctgatggaaaagccgaac
gacgccaagatcatctgcggcaagatcgtggaagcggcgcgtgcgcgcgaagcagcccgc
aaggcccgcgacctcacccgccgcaagggtgtgatggacggcctgggcctgtcgtcgaag
ctggccgactgccaggaacgcgacccggcgctggccgagctgtacatcgtcgagggtgac
tccgcaggcggttccgccaagcagggtcgcgaccgtaagttccaggccatcctgccgctg
cgcggcaaggtgctgaacgtggaaaaggcgcgcttcgaaaagatgctgtcgtcggaacag
atcacgaccctgatcgcgacgctcggcacgtcgatcggcccggacgagttcaacgtcgac
aagctgcgctaccaccgcatcatcatcatgaccgacgcggacgtcgacggtgcccacatc
cgcaccctgctgctgaccttgttctaccgccagatgccgcagctggtcgagcgcggccat
atctacatcgcgcaaccgccgctgtacaaggtcaaggccggccgcgatgagcgctacctc
aaggacgacgtcgaggaagcgagctacatgatgcgtttcgcgctgaacggcgccgccctg
ctgccgaaggaaggcgcggaggcgatcaccgacggtgcgctgggcgacctggtcgacaag
tacaacaaggccaacgcgatcatgatgcgcctgtcgcgcgtgatcgaccgcgccgccctg
tccgccatcatgaccggcgtgaagctggacctgtcgacccaggaagcggccgagaaatcg
gcccaggccatggccgacgcgatccacgacccgagcgtgaaggtgggcgtgcgttcggac
gaactgtccgacaagcacagcctgcgcatcgagcgcatccactacggcaacgtgcaggtg
acgtcgatcgacgccgactttgtcgccagcgcggattacaagacgctggaaaactcggcg
gagacgttccagggcctgatgggcgacggcgcgatcatccgccgcggcgaaggcgagaag
atgaaggaattcgccgtgcgcgacttccagcaggccatggaatggctgcgcgaggaagcc
gagcgtggcgtctccaagcaacgctataaagggctgggcgagatgaatcccgagcagctg
tgggaaacgaccatggatccgaccgtgcgtcgcctgctgaaggtgcagatcgaggatgcg
attgccgccgaccagatctttaccacgctgatgggggatgaagtggagccgcgccggaac
tttattgagtcgaatgcgctgcaggcggggaatatcgacgtctga
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