Telluria mixta: P0M04_13460
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Entry
P0M04_13460 CDS
T08884
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tmj
Telluria mixta
Pathway
tmj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P0M04_13460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmj03019
]
P0M04_13460
Enzymes [BR:
tmj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P0M04_13460
Messenger RNA biogenesis [BR:
tmj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P0M04_13460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
P-loop_SecA
AAA_19
AAA_22
Utp25_C
HEM4
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WEM98666
LinkDB
All DBs
Position
2992240..2993700
Genome browser
AA seq
486 aa
AA seq
DB search
MSETPTTIEDGGAPTVRFADFGLAPEIQRALSDQGYVHPTPIQAKAIPIVLQGRDVMGAA
QTGTGKTASFSLPIIQLLLPHANTSMSPARHAVRALVLTPTRELAIQVAENVKAYAQHTP
LRSTVVFGGMDMKPQTEILRRGVEIVIATPGRLLDHVEQKNISLAQVQMLVMDEADRMLD
MGFLPDLQRIINLLPKKRQNLMFSATFSPEIKKLASSFLNDPLTIEVARSNATNTSITQV
LYKVDEEQKRNVVEHLIRARDLKQVLVFSNTKIGASRLARYLEQAGIKASAIHGDKTQQE
RIAALDAFKNGEIDVLVATDVAARGLDITDLPCVINYDLPYNAEDYVHRIGRTGRAGATG
DALSVYSDKDERLLVDIEKLIKQTITRGELTGFSPSRGVERSERPGDRRGGRRESDSPRA
ERGERAERTDRGPRSYGAPRREKIDPWFLKPYEPAAAPRKDTSAAPAASSKPKPKLAALL
GGLPKQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaacaccgaccaccattgaagatggcggcgcgccgaccgtgcgctttgccgat
ttcggcctcgcgcctgagatccagcgtgcgctgtcggaccagggctatgtccatccgacc
ccgatccaggccaaggcgatccccatcgtcctgcagggccgcgacgtcatgggcgcggcc
cagaccggcaccggcaagacggcgagtttctcgctgccgatcatccagctgctgctgccg
catgccaataccagcatgtcgccggcgcgccatgccgtgcgcgccctggtgctgacgccg
acgcgcgaactggcgatccaggtcgccgagaacgtcaaggcctatgcccagcatacgccg
ctgcgctccaccgtcgtcttcggcggcatggacatgaagccgcagaccgagatcctgcgc
cgcggcgtcgagatcgtcatcgctacgccgggccgcctgctcgaccacgtggagcagaag
aacatcagcctggcccaggtccagatgctcgtgatggacgaagccgaccgcatgctcgac
atgggcttcctgcccgacctgcagcgcatcatcaacctgctgccgaagaagcgccagaac
ctgatgttctcggccacgttctcgcccgagatcaagaagctggcgtcgagtttcctgaac
gacccgctgacgatcgaagtcgcgcgcagcaacgccacgaacacgtccattacccaggtg
ctgtacaaggtcgacgaagagcagaagcgcaacgtcgtcgagcacctgatccgcgcgcgc
gacctgaagcaggtcctcgtgttctcgaacaccaagatcggcgcgtcgcgcctggcgcgc
tacctcgagcaggccggcatcaaggcctccgccatccacggcgacaagacgcagcaggaa
cgcatcgccgcgctggacgccttcaagaacggcgagatcgacgtgctcgtcgcgaccgac
gtcgcggcgcgcggcctcgacatcaccgacctgccgtgcgtgatcaactacgacctgccg
tacaacgccgaggactacgtgcaccgcatcggccgcacgggtcgcgccggcgccacgggc
gatgcgctgtccgtgtattcggacaaggacgagcgcctgctggtcgacatcgagaagctg
atcaagcagaccatcacgcgcggcgagctgacgggattctccccgtcgcgcggcgtcgag
cgcagcgagcgcccgggcgaccgccgcggcggccgccgcgaatcggacagcccgcgcgcc
gagcgtggcgagcgtgccgagcgcaccgaccgcggcccgcgcagctacggcgcgccgcgc
cgcgagaagatcgatccgtggttcctcaagccgtacgaaccggcggcggccccgcgcaag
gacacgtccgcggcaccggctgcatcgagcaagccgaagccgaagctggcggcgctgctc
ggcggactccccaagcagtag
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