Telluria mixta: P0M04_17465
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Entry
P0M04_17465 CDS
T08884
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
tmj
Telluria mixta
Brite
KEGG Orthology (KO) [BR:
tmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmj03009
]
P0M04_17465 (rlmD)
Enzymes [BR:
tmj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
P0M04_17465 (rlmD)
Ribosome biogenesis [BR:
tmj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
P0M04_17465 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
RrnaAD
Methyltransf_25
TRM5-TYW2_MTfase
MTS
Methyltransf_15
TRAM
Methyltrans_SAM
Cons_hypoth95
Methyltransf_32
UPF0020
PCMT
Methyltransf_11
DUF6402
Motif
Other DBs
NCBI-ProteinID:
WEM93300
LinkDB
All DBs
Position
3931787..3933202
Genome browser
AA seq
471 aa
AA seq
DB search
MQETFINIKSLDMDARGVGHLENEDGTPGKVIFVEGALPGERVSFETLRKKKNWESGRMV
TLQKASSMRVEPKCPHFWHCGGCSMQHLEPSAQVAMKQRVLEDNLWHIGKTKAENIMRPM
YGPTWDYRYRARLSVRWVAKKGTVLVGFHERHSSYVADMTSCEILPDHLSAMLVPLRELV
GALSIYQQMPQIEIAVGEETTVLVLRIMAPLSPADETLVKAFADQWNIQWWLQPKGPDTA
APYYPLGKELYYTLPEFGIRMPFKPTDFTQVNHQINRLLVHKALNLLEVQPTDRVADLFC
GLGNFTLPLATQAREVVGIEGSTALTTRALENAKANGLADKTTFYTRNLFEVTKDDLIAL
GKFDRMLVDPPRDGAVALAIALAELRLTNPDLLPQRIVYVSCSPSTLARDAGILTHRAGY
VLKKAGVANMFPHTSHVESIGVFERLENFQPREFAAPDVKDTASAGGDAVQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaccttcatcaacatcaaatccctcgacatggacgcgcgcggcgtcggccac
ctggagaacgaggacggcacgccgggtaaagtgatcttcgtcgaaggcgcgctgccgggc
gagcgcgtcagcttcgagaccctgcgcaagaagaagaactgggaatcgggccgcatggtc
acgctgcagaaggcatcgtcgatgcgcgtggaaccgaaatgtccgcatttctggcattgc
ggcggctgctcgatgcagcacctggagccgtcggcccaggtcgcgatgaagcagcgcgtc
ctggaagacaacctgtggcacatcgggaagacgaaggccgagaacatcatgcgcccgatg
tacggccccacgtgggattaccgctaccgcgcacgcctgtcggtccgctgggtggccaag
aagggcacggtgctggtcggtttccacgagcgtcactcgtcgtacgtggccgacatgacg
agctgcgagatcctgccggaccacctgtcggccatgctcgtgccgctgcgcgagctggtg
ggcgcactgtcgatctaccagcagatgccgcagatcgagatcgccgtcggcgaagaaacg
accgtgctcgtgctgcgcatcatggcgccactctcgcccgccgacgagacgctggtgaaa
gcgttcgccgaccaatggaacatccagtggtggctgcagccgaagggaccggacaccgcg
gcgccgtactacccgctcggcaaggagctgtactacacgctgccggaattcggcatcagg
atgccgttcaagccgaccgatttcacgcaggtgaatcaccagatcaaccgcctgctcgtg
cacaaggcgctgaacctgctcgaggtgcagccgaccgaccgcgtggccgacctgttctgc
ggcctcggcaacttcaccctgccgttggccacgcaggcgcgcgaagtcgtcggcatcgaa
ggcagcacggcgctgacgacgcgcgcgctggaaaacgcgaaggcgaacggcctcgccgac
aagacgacgttctatacgcgcaacctgttcgaggtgacgaaggacgacctgatcgcgctc
ggcaaattcgaccgcatgctggtcgacccgccgcgcgacggcgccgtcgcgctggcgatc
gcattggccgaactgcgcctgacgaacccggacctgctgccgcagcggatcgtgtacgtg
tcgtgcagcccgtcgacgctggcgcgcgatgccggcatcctgacgcaccgcgccggttac
gtgctcaagaaggcaggtgtggcgaacatgttcccgcacacgtcgcacgtggaatcgatc
ggcgtgttcgagcgcctcgagaatttccagccgcgcgaattcgcggcaccggacgtcaag
gacactgcgtcagcgggcggcgacgcggtccagtaa
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