Telluria mixta: P0M04_20575
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Entry
P0M04_20575 CDS
T08884
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tmj
Telluria mixta
Brite
KEGG Orthology (KO) [BR:
tmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmj03032
]
P0M04_20575
03400 DNA repair and recombination proteins [BR:
tmj03400
]
P0M04_20575
Enzymes [BR:
tmj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
P0M04_20575
DNA replication proteins [BR:
tmj03032
]
Prokaryotic type
DNA Topoisomerases
P0M04_20575
DNA repair and recombination proteins [BR:
tmj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P0M04_20575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WEM93880
LinkDB
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Position
complement(4596310..4597437)
Genome browser
AA seq
375 aa
AA seq
DB search
MKNDDPALHDPVPNTDPPAAAKAAGLRYVHDDRPGIRREPAKDGFRYLDAKGEPVEDEAT
LKRIRSLAIPPAWTDVWICPQANGHLQATGRDARGRKQYRYHPKWREVRDEVKYERMIKF
GKALPQIRKEVDRALSLPGLPRDKVLATIVYLLEATMMRIGNDEYARENKSYGLTTLRNR
HVKIDGSEVEFRFRGKSGVYHDVKVHDRRLARIIQRTRDLPGQDLFQYLDEDGETHTVGS
ADVNDYLRTITGEDYTAKDFRTWSGTVLAAMALQEFEAVDSDAQAKKNVVRAIESVAERL
GNTPSVCRKCYVHPAVLDAYLDGTMLEGLRARAEESLVEDLKDLQPEEAAVLAMLERRLA
QETAANDLAVKRRAA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgatgaccccgccctgcacgacccggtgccgaacaccgacccgcccgccgcc
gccaaggccgcgggcctgcgctacgtccacgacgaccgtcccggcatccgccgcgagccg
gccaaggacggttttcgctacctcgacgcgaagggcgagccggtcgaggacgaggccacc
ctcaagcgcatcaggtcgctggcgatcccgcccgcgtggacggacgtctggatctgcccg
caggccaacggccacctgcaggcgacgggccgcgacgcacgcgggcgcaagcagtaccgc
taccacccgaaatggcgcgaggtgcgcgacgaggtcaagtacgaacgcatgatcaagttc
ggcaaggcgctgccgcagatccgcaaggaagtcgaccgcgcgctgtccctccccggcctg
ccgcgcgacaaagtcctcgcgacgatcgtctacctgctggaagcgacgatgatgcgcatc
ggtaacgacgaatacgcccgcgagaacaagtcgtacggcctgaccaccctgcgcaaccgc
cacgtcaagatcgacggcagcgaggtcgagttccgcttccgcggcaagagcggcgtgtac
cacgacgtcaaggtgcacgaccggcgcctggcccgcatcatccagcgcacgcgcgacctg
cccggccaggacctgttccagtacctcgacgaggacggcgaaacgcacacggtgggctcc
gccgacgtgaacgactacctgcgcacgatcacgggcgaggattacacggcgaaggacttc
cgcacgtggtccgggaccgtccttgccgcgatggcgctgcaggaattcgaggccgtcgat
tccgacgcgcaggcgaagaagaacgtcgtgcgcgccatcgaatccgtcgccgaacggctt
ggcaatacgccctccgtctgccgcaagtgctatgtgcacccggccgtgctggacgcctac
ctcgacggcacgatgctggaaggcctgcgcgcccgcgccgaggaaagcctcgtcgaagac
ctgaaggacctgcagcccgaggaagcggccgtgctcgcaatgctggaacggcgcctcgcg
caggagactgccgccaacgacctggccgtcaagcggcgcgccgcctga
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