Telluria mixta: P0M04_20800
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Entry
P0M04_20800 CDS
T08884
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tmj
Telluria mixta
Pathway
tmj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
P0M04_20800 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmj03400
]
P0M04_20800 (recD)
Enzymes [BR:
tmj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
P0M04_20800 (recD)
DNA repair and recombination proteins [BR:
tmj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P0M04_20800 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
PhoH
AAA_28
DEAD
SLFN-g3_helicase
AAA_16
TraI_hel_assoc_N
nSTAND3
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
WEM93924
LinkDB
All DBs
Position
4659103..4661055
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AA seq
650 aa
AA seq
DB search
MKPDATGDTTTFWAEVERLTEAGELRRLSGVFARFVASLGDGACARSTPLLLASLVLSEL
EGRGHSCLMLDDLVGDPAALLGWADEDWKALAKAAKPLPRGVKGWMSQLAGCEQVWRVGD
LDYDQPLVLDDTRLYLRRYWRDETLVATCVRMRAQERRDVDIEQAHTWLEALFGAQRAGE
SPDWQRIACAVALRGAFAIITGGPGTGKTYTVARLLALLFATAPDAARQRIALAAPTGKA
AARLKQSIDKALTDLADRVGGALPLRELTARMGAARTLHSLLGARPDTRSFAHHRGNPLD
VDVLIVDEASMVHLEMMASLLDALPAGATLILLGDKDQLASVEAGAVLGDLCHDAQAGRY
DAETLAYVQAASGETIPAGYEGQGGPLAQQTVMLRHSRRFGGPIGKLALAVNAGDVDGAA
AALRAPDAAGVLRWIDHAHQHHVIQLANEGYRPYLELLRAGSGSHANHEEWVRAVLQRFE
AFRVLCAVREGEWGVEGLNEAIELRLAHAGLIVRSDWYVGRPVMVTRNDYPTGTFNGDIG
LALPDPARPGSLRVWFLEGDNVRSVLATRLRHVETAYAMTVHKSQGSEFAHTVLALPKEG
GAVLARELVYTGITRASRQFTLTTPAPAVLGEAILRRTHRASGLRGMIEQ
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgatgcgaccggggatacgactacgttctgggccgaggtcgaacgcctgacg
gaagcgggcgaactgcgccggctgtccggcgtattcgcgcgcttcgtcgcgagcctgggc
gatggcgcatgcgccagatcgacgccgttgctgctcgcgtcccttgtgctgtccgaactg
gaagggcgaggccatagctgcctgatgctggacgacctggtgggcgatccggccgcgctg
ctcggctgggccgacgaggactggaaggcgttggcgaaggcggccaagccgctgccgcgc
ggcgtgaaggggtggatgtctcagctggccgggtgcgagcaggtgtggcgcgtgggcgac
ctcgattacgaccagccgctcgtgctggacgacacgcggctctacctgcgccgctactgg
cgcgacgagaccctggtcgccacgtgcgtgcgcatgcgcgcgcaggaacgccgcgacgtc
gacatcgagcaggcgcacacgtggctggaagccctgttcggcgcccagcgcgcgggcgaa
tcgcccgactggcagcgcatcgcgtgcgccgtcgcgctgcgcggcgcgttcgccatcatc
acgggcggcccgggcacgggcaagacgtacacggtggcgcgcctgctggcgctgttgttc
gcgacggcgccggacgccgcgcgccagcgcatcgcgctcgccgccccgacaggcaaggcc
gcggcgcgcctgaagcagtcgatcgacaaggcgctgaccgacctggccgaccgcgtgggc
ggcgccttgccgctgcgcgaactgacggcgcgcatgggcgccgcgcgcacgctgcacagt
ctccttggggcgcgcccggacacgcgcagcttcgcgcaccaccgcggcaacccgctcgac
gtggacgtgctgatcgtcgacgaagcgtcgatggtgcacctggagatgatggcgtcgctg
ctggacgcgctgcccgcgggcgccaccttgatcctgctgggcgacaaggatcaattggcg
tcggtggaagcgggcgccgtgctgggggacctgtgccacgacgcgcaggccggccgctac
gatgcggagacgctggcgtacgtgcaggccgcgagcggcgagacgatcccggccgggtat
gagggccagggcggcccgctcgcccagcagaccgtgatgctgcgccacagccgccgcttc
ggcggtccgatcggcaagctggcgctggccgtcaacgcgggcgacgtcgacggcgcggcc
gcggcgctgcgtgcgcccgacgcggccggcgtgctgcgctggatcgatcacgcgcaccag
caccacgtgatccagctggcgaacgagggttatcgcccgtatctcgaactgctgcgtgca
ggtagcggcagtcacgcgaaccacgaggagtgggtgcgcgccgtgctgcagcgcttcgaa
gcgttccgcgtgctgtgcgcggtgcgcgaaggcgagtggggcgtcgaaggcctgaacgag
gcgatcgaactgcgtctcgcgcacgccggcctgatcgtgcgcagcgactggtacgtgggc
cgccccgtcatggtcacccgcaacgactacccgacgggcacgttcaacggcgacatcggc
ctcgcactgccggatccggcccgtcccggttcgctgcgcgtgtggttcctggaaggcgac
aacgtgcgcagcgtgctggccacgcgcctgcgccacgtggagacggcgtatgcgatgacg
gtccacaaatcgcagggctccgagttcgcgcacacggtgctggccctgccgaaagagggg
ggcgccgtgctggcgcgcgagctagtctatacgggcatcacgcgcgccagccgccagttc
acgttgacgacgccggcgccggccgtgctcggcgaggcgatcctgcggcgcacgcaccgg
gccagcgggctccgggggatgatcgaacaatag
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