Telluria mixta: P0M04_31845
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Entry
P0M04_31845 CDS
T08884
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
tmj
Telluria mixta
Pathway
tmj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tmj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
P0M04_31845 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmj03021
]
P0M04_31845 (rpoD)
Transcription machinery [BR:
tmj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P0M04_31845 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
CENP-B_dimeris
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
WEM95994
LinkDB
All DBs
Position
complement(7245676..7248402)
Genome browser
AA seq
908 aa
AA seq
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MKNTAKTLTLTAKKAPAKSTAQLSVPKTATSYFLETEAAAKVTVVKTRSRLASLKAVQAE
EASRLQPEQFDEAADAGEAQAEAVAADVQAADNVAEVAEPVAEPVIAPVAAVAFDEADDA
IPTPTAPAAPPVIVKKRVSRLAALKADAAPEAAPAAPEPVAAAPAVPAAVLAAAAEPAAR
VVRTRTARRIEPSVATTSTQPTGTVSTTTDAATLAAIDTSGYLLPQVKVPGRRGRKPSEF
VPENDEIAALNAVERAELKAASKLRERKAKGGASLFGAAEGFSAEELEKRRQQLKNLINM
GKERGYLTHAEINDHLPENIIDPEAIEGIIATFNDMGIAVYERAPEAEMMLLSDAVVTAT
SEDEVEAAAATALSTVDSDFGRTTDPVRMYMREMGAVSLLTREGEIAIAKRIEDGLKDMV
QAISACPVTISEIIALSHKIAKDELKIDDVVDGLIDHNEGAPATAPVTSASDEDEDEEEE
DVEEEEDEGGAGGSAAAGYSAEQLAALKKGALDKFSIIEKQFDKMGHAFKTQGYGSPAYT
AAQEVISSELLGIRFTAKVVEKLCDTLRHQMDEVRAIERSVLDICVNRCGMPRAHFIKVF
PGNETDLEWVQREVDCAYPYSAVLKRNAPAILELQQRMIDLQARVALPLADLRTINRQMA
AGEKRARTAKREMTVANLRLVISIAKKYINRGLQFLDLIQEGNIGLLKAVDKFEYRRGYK
FSTYATWWIRQAITRSIADMARTIRVPVHMIETINKMNRISRQIMQETGTEPDMATLATK
MEMPESKVREIMKIAKEPISMETPMGEDGDSQLGDFIEDNATLAPLDAAMHASMRNVIKE
VLDSLTPREAKVLRMRYGVEMSNDHTLEEVGKQFDVTRERIRQIEAKAMSKLRQPSRSDK
LKTFLQNQ
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaccgccaagaccctgacactgacagcgaagaaagcgccggccaagagcacg
gcccagctgtcggtgccgaagaccgcgacctcgtatttcctcgaaacggaagcggcagcc
aaggtgacggtggtgaagacgcgttcgcgcctggcgtcgctgaaggcagtgcaggccgag
gaagcgtcgcgtctgcagccggagcagttcgacgaggccgccgacgcgggtgaagcgcag
gccgaggccgtcgccgccgacgtgcaggcagcggacaacgtcgccgaagtcgccgaaccc
gtcgccgaacccgtcattgccccggtcgccgccgtggccttcgacgaagcggacgacgcg
atcccgacgccgaccgcgcccgccgcgccgccggtgatcgtcaagaagcgcgtctcgcgc
ctggccgcgctgaaagccgacgccgcacccgaagctgccccggccgcaccggaaccggtc
gccgccgcaccggcagtgccggcagccgttcttgcggccgccgctgagccggccgcccgc
gtcgtgcgcacccgcaccgcgcgccgcatcgagccgtccgtcgcgacgacgtccacccag
ccgaccggcaccgtcagcacgacgacggacgccgccacgctggccgcgatcgacacgtcc
ggctacctgctgccgcaggtgaaagtgccgggccgccgcggccgcaagccgagcgaattc
gtgccggagaacgacgagatcgcggcgctgaacgccgtcgagcgcgccgaactgaaggcc
gcgtcgaaactgcgtgagcgcaaggccaagggcggtgcctccctgttcggcgcggcggaa
ggcttctcggccgaggaattggaaaagcgccgccagcagctgaagaacctgatcaacatg
ggcaaggagcgcggctacctgacccatgcggagatcaacgaccatctgccggaaaacatc
atcgatccggaagcgatcgaaggcatcatcgcgacgttcaacgacatgggcatcgccgtc
tacgagcgcgcgccggaagcggaaatgatgctgctgtcggacgcggtcgtcacggcgacc
tccgaggacgaagtcgaagccgcggccgcgaccgcactgtcgaccgtcgactccgacttc
ggccgcacgaccgatccggtccgcatgtacatgcgcgaaatgggtgccgtgtcgctgctg
acgcgcgaaggcgagatcgccatcgccaagcgcatcgaggacggcctgaaggacatggtg
caggcgatctccgcgtgcccggtgacgatctccgagatcatcgcgctgtcgcacaagatc
gccaaggacgagctgaagatcgatgacgtcgtggacggcctgatcgaccacaacgagggc
gcccccgccaccgcgccggtgaccagcgcgagcgacgaggacgaggacgaggaagaagaa
gacgtcgaggaagaggaagacgagggcggtgccggcggcagcgcagcggcgggctactcg
gccgagcaactggccgcgctgaaaaagggcgcgctggacaagttctcgatcatcgagaag
cagttcgacaagatgggccacgcgttcaagacgcagggctacggctcgccggcctacacg
gcggctcaggaagtgatctcgtcggaactgctgggcatccgcttcacggccaaggtcgtg
gaaaagctgtgcgacaccttgcgccaccagatggacgaagtgcgcgccatcgaacgttcc
gtgctcgatatctgcgtgaaccgctgcggcatgccgcgcgcccacttcatcaaggtcttc
ccgggcaacgagacggacctggaatgggtgcagcgcgaagtcgactgcgcgtatccgtac
agcgccgtgctgaaacgtaacgccccggcgatcctggaactgcagcagcgcatgatcgac
ctgcaggcgcgcgtggcgctgccgctggcggacctgcgcaccatcaaccgccagatggcg
gccggcgaaaagcgcgcccgcacggcgaagcgcgaaatgaccgtggccaacctgcgtctc
gtgatctcgatcgcgaagaagtacatcaaccgcggcctgcaattcctggacctgatccag
gaaggcaacatcggcctgctgaaggctgtcgataaattcgagtaccgtcgcggctataaa
ttctcgacgtacgcgacgtggtggatccgccaggcgatcacgcgttcgatcgccgacatg
gcccgcacgatccgcgtgccggtgcacatgatcgagacgatcaacaagatgaaccgtatc
tcgcgccagatcatgcaggaaacgggcaccgagccggacatggcgaccctggcgacgaag
atggagatgccggaatcgaaggtccgcgagatcatgaagatcgcgaaggaaccgatctcg
atggaaaccccgatgggcgaggacggcgattcgcagctgggcgacttcatcgaggacaac
gcgaccctggccccgctggacgccgcgatgcatgcgtcgatgcgcaacgtgatcaaggaa
gtgctggactcgctgaccccgcgcgaagcgaaggtcctgcgcatgcgctacggcgtcgag
atgtcgaacgaccacacgctggaagaagtgggcaagcagttcgacgtgacccgcgagcgt
atccgccagatcgaagcgaaggcgatgagcaagctgcgccagccgtcgcgttcggacaag
ctcaagacgttcctgcagaaccagtaa
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