Temperatibacter marinus: QGN29_00115
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Entry
QGN29_00115 CDS
T09370
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tmk
Temperatibacter marinus
Pathway
tmk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QGN29_00115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmk03021
]
QGN29_00115
03400 DNA repair and recombination proteins [BR:
tmk03400
]
QGN29_00115
Enzymes [BR:
tmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QGN29_00115
Transcription machinery [BR:
tmk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QGN29_00115
DNA repair and recombination proteins [BR:
tmk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QGN29_00115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
WND04171
UniProt:
A0AA52EG51
LinkDB
All DBs
Position
complement(21715..22728)
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AA seq
337 aa
AA seq
DB search
MQKNWQELIKPSNLVIEPGSDPLRRAKIVVEPLERGYGQTLGNALRRVLLSSLQGGAVTS
IHIEGVLHEFSSVPGVREDVTDIVLQVKKLPVRVMSETSKRLHLTASGPGEVLASQISEV
ADVEVLDKEMVLCHLDEGATLNMELTVSSGKGYVAAEHNRPEDAPIGLIPVDALYSPVTK
VSYNVDATREGDVMDYDKLSMVIETDGTVTPEDALAFSARILQDQLGVFVNFDEPEDTKA
DEEDEEPAINRQLLRKVEELELSVRSANCLKNDNIVYIGDLVQKTEAEMLRTPNFGRKSL
NEIKEVLASMGLRLGMELQAWPPENIEELAKKLENEF
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atccagaaaaactggcaagaacttatcaaaccaagcaaccttgtaattgagccaggctca
gatccattacgcagggcgaaaattgttgtagaaccgctagagcgtggttatggacagact
ttgggtaatgccctgcgtcgtgttcttctatcatctctacaaggtggtgctgtcacaagt
atccacattgaaggtgttcttcatgaattctcatctgttccaggtgtccgcgaagatgtg
actgacattgtccttcaggttaagaaattacctgttcgtgttatgtctgaaacatcaaag
cgtcttcacttgacagcttcgggtccaggagaagtattagcttctcagattagcgaagtt
gctgatgtcgaagttcttgataaagaaatggttctttgtcaccttgatgaaggtgcaaca
ttgaatatggaattaactgtttcatctggaaaaggctatgttgctgcggagcataatcgc
cctgaagatgcaccaattggtcttattcctgttgatgcactctacagcccagtgacaaaa
gtaagctataatgttgatgcaacacgtgaaggtgacgtgatggattatgacaagctttct
atggttattgaaacagacggaacggtgacacctgaagatgcacttgctttctcagcacgt
attcttcaagaccagctcggtgtttttgttaactttgatgagcctgaggatacgaaggct
gatgaagaagatgaagagccagcgatcaatcgtcaattgcttcgtaaagttgaagagctt
gagctttctgttcgttctgcaaattgcctgaaaaacgataacatcgtttacattggtgat
ttggttcagaaaactgaagctgaaatgcttcgcacacctaactttggccgtaaatctctt
aatgagattaaagaagttcttgcttctatgggtcttcgtttgggtatggaactacaagca
tggccgccagagaatatcgaagaactggctaaaaagcttgaaaacgaattttaa
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