Temperatibacter marinus: QGN29_04970
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Entry
QGN29_04970 CDS
T09370
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tmk
Temperatibacter marinus
Brite
KEGG Orthology (KO) [BR:
tmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmk03016
]
QGN29_04970
Enzymes [BR:
tmk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
QGN29_04970
Transfer RNA biogenesis [BR:
tmk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QGN29_04970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WND03727
UniProt:
A0AA52HAL0
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All DBs
Position
1095108..1095722
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AA seq
204 aa
AA seq
DB search
MTIHFHEGDLPEGLDFGSSVAVDSETMGLNPHRDRLCVVQLSSGDGHAHLVRFKKGAYEA
PRLSALMADTSVEKIFHFARFDVAIIEKYLGVTCEPVFCTKIASKLVRTYTDRHGLRDLC
LELIGVNLDKQQQSSDWGADVISEPQKAYAASDVLYLHKLRDQLIMMLEREGRMAFAQDA
FAFLPTRARLDLAGYEPMDIFAHK
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccatacacttccacgagggggatttaccagaaggcttggatttcggctcaagcgtt
gctgttgatagcgaaaccatgggattaaaccctcatcgggaccgtctttgtgttgttcaa
ctttccagcggggatgggcatgctcatttggtgcggtttaaaaaaggtgcatatgaggcc
ccgcgtctcagtgctttaatggcagacacctcggttgagaaaatttttcattttgcccga
tttgatgtggcaatcattgaaaaatatttgggggtgacttgtgaacccgttttttgcact
aagatcgcttcaaaacttgtaaggacatatacagaccgtcatggtttacgggatctttgt
ttggaattaataggggtaaatctcgataagcagcaacaatctagtgattggggggctgat
gtgatctcagagccacaaaaggcctatgcagcaagcgatgtactctatctccataaattg
cgggatcaattgatcatgatgctagagcgggaagggcgcatggcttttgcacaggatgct
ttcgcttttttaccaacacgggcgcgtctcgatttagcaggctatgaacctatggatatt
tttgctcataaataa
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