KEGG   Temperatibacter marinus: QGN29_05415
Entry
QGN29_05415       CDS       T09370                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
tmk  Temperatibacter marinus
Pathway
tmk03030  DNA replication
tmk03410  Base excision repair
tmk03420  Nucleotide excision repair
tmk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tmk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    QGN29_05415 (polA)
   03410 Base excision repair
    QGN29_05415 (polA)
   03420 Nucleotide excision repair
    QGN29_05415 (polA)
   03440 Homologous recombination
    QGN29_05415 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tmk03032]
    QGN29_05415 (polA)
   03400 DNA repair and recombination proteins [BR:tmk03400]
    QGN29_05415 (polA)
Enzymes [BR:tmk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     QGN29_05415 (polA)
DNA replication proteins [BR:tmk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     QGN29_05415 (polA)
DNA repair and recombination proteins [BR:tmk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     QGN29_05415 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     QGN29_05415 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 Taq-exonuc NYN_YacP HHH_2
Other DBs
NCBI-ProteinID: WND03812
UniProt: A0AA52EE69
LinkDB
Position
complement(1191493..1194273)
AA seq 926 aa
MTDATPHLYLVDGSGFIFRAYHAIRPGSMNRPDGTPVNAVYGFSSMLFKLLQDLRDGERP
SHLAVIFDAAKKTFRNDIYPEYKAHRPPAPEDLVPQFSIIREAVEAFGVKSLEMPGYEAD
DLIATYAVQARKKGWDVTIVSSDKDLMQLVDQGTTMFDSMKNKRIGIDGVHEKFGVGPEK
VIDVQALAGDSADNVPGVPGIGVKTAAQLINDYGDLDTLLDRAAEIKQNKRRENLLEFAD
QARISRDLVTLKVDCPITDDLETMAVKNPVAEDLLSFIDTQSFRSLRTKVINHYGADLED
TAHQAADNEIEKIETDYSCITTLDDLSLWIEAAYSAGVIAVDTETTGLDATAVDLVGISL
SIDAGKACYIPLAHKGDSDDMFAVPPTQIDKAKALAALKPLFEDESVLKIGQNMKYDMTI
LAREGIAVSPIDDTMLMSYALDAGRHGHGMDELSGINLDITPVAFKEIAGTGKNQKTFDL
IPLKEATHYAAEDADLTGRLARILKPRLAAEKVRTVYETLERPLVKVLSDMEQAGIKVDG
AELRRLSNEFAEGIQRLEIDIHDLAGRPFNIASPKQLGEILFEDMGLKGGKKSKTGAFST
NVDVLEKLAGEGVDIAQKVIEYRQFAKLKSTYTDALVGQINPATGRVHTSYSLASTTTGR
LSSNDPNLQNIPIRTSEGRKIRRAFIPEEGHKLVAADYSQIELRILAHMADIQALKDAFH
EGIDIHAMTASQVFGVPVEGMDPMVRRNAKAINFGIIYGISAFGLARQLGISRKEAQGFI
DAYFARFPGIRAYMDETIEFAKEKGHVETLFGRKVHIGAIQEKNPMRRQFGERAAINAPI
QGTAADVIRRAMIQMPPALERAGLLPDVKMLLQVHDELVFEIPEARVTEASAVIKSTMEA
ACEPILEMAVPLVVDVGVGDDWEEAH
NT seq 2781 nt   +upstreamnt  +downstreamnt
atgacagacgcgacaccgcatctctatcttgtagatggatctggatttatcttccgagcc
tatcacgccataagaccgggcagtatgaacagaccggacggaactcctgtgaatgctgta
tatggcttttcaagcatgctgtttaaactgctacaagatttaagagatggagagcgtccc
tctcacttagccgtgatctttgatgcggcaaaaaaaacttttagaaatgatatctatcca
gaatataaagcccaccgcccacctgcacccgaagatttagtgccacagttttctatcatt
cgtgaagccgttgaagcctttggggttaaatctttagaaatgccaggctacgaagctgat
gatctgattgcaacttatgctgtgcaagcccgcaaaaaaggctgggatgtgacaatcgtt
tcaagtgacaaagatttgatgcagcttgttgatcaggggacgaccatgtttgacagcatg
aagaacaaacggatcgggattgatggagttcatgaaaaatttggtgtaggcccggaaaaa
gtgattgatgttcaggcgcttgccggtgacagtgctgataatgtgcctggcgtacctggt
atcggcgtcaaaacagcagcccaacttatcaatgactatggggatttagatacacttcta
gatcgtgctgcagaaattaaacagaataagcgcagagagaaccttctagaatttgctgac
caagcgcgcatcagccgcgatcttgtgactttaaaggtcgattgcccgatcactgatgat
ctcgaaacaatggctgtaaaaaacccagtggccgaagacctgctctcattcattgacacc
caatcttttagaagtttacgcacaaaagtgattaatcattacggcgctgatcttgaagac
acggcacatcaagccgcagacaatgaaattgaaaaaatcgagactgactatagctgcatc
accactcttgatgacctctcgttgtggattgaagctgcttattcagcgggcgttatagct
gttgatacagagactacaggcttagatgctactgcggtcgatttagttgggattagtcta
tccatagacgcaggcaaggcttgctatattcctcttgcccataagggggatagtgatgat
atgtttgcagtgcctccaacacaaattgataaagccaaagccctcgcggccttgaaacct
ctctttgaagatgagagcgttttaaaaattggccaaaacatgaaatacgatatgacgatt
ctcgcccgagaaggtatcgctgtctctccgatcgatgatacgatgcttatgtcttacgcc
ctcgatgccggtcgtcatggtcacgggatggatgaactatcaggcataaatttagacata
actcccgttgcctttaaagagatagcgggcacaggtaaaaatcaaaaaacattcgacctt
atcccactgaaagaagccacccattatgctgctgaagatgcagatctaacaggacgtctt
gctcgcattctgaagcctcgacttgctgctgaaaaggtcagaaccgtttatgaaacgctt
gagcgcccacttgtgaaagtcctctcggatatggaacaggctggaataaaggtagacggc
gcggaactaagacgcctcagtaatgaatttgctgagggtatacagcgcttagaaattgat
attcatgatctggcagggcgcccctttaatattgcctctcccaaacaacttggcgaaatc
ctatttgaggatatgggcttaaaagggggtaagaaatctaagacaggggccttctctacc
aatgttgatgttttagaaaaacttgctggtgaaggcgtagatattgcacaaaaggttatc
gaataccgtcaatttgcaaaactgaaaagcacctatactgacgcgctggtgggacaaata
aatcctgcaacaggtcgtgttcacacaagttattcactggccagcaccaccacaggccgc
ctatccagtaatgatccaaacttacagaatattccaatcagaaccagtgaaggccgcaaa
attcgaagagcttttatccccgaagaaggccataagctcgtcgccgcagattacagccaa
atcgagctacgcatcttggcccatatggcggatattcaagctcttaaagacgcctttcat
gaaggaattgatattcatgccatgaccgcctcacaagtgttcggcgtccctgtagagggc
atggaccctatggtgcggcggaatgccaaagcaattaactttggtattatttacggcatt
tcggcctttggacttgcccgtcaattagggatcagtcgtaaagaagctcaaggttttatt
gacgcttattttgcacgcttccccggcattcgggcctatatggatgaaaccatagaattc
gcaaaagagaaagggcacgttgaaaccctatttggacggaaagtccacatcggcgctatc
caagaaaagaatcctatgcggcgtcaatttggtgagcgcgcagcgattaatgcccctatc
caagggactgccgctgatgtgatccggcgggcaatgattcaaatgcctcctgcccttgag
agagcaggcctcctccccgatgtaaaaatgctactgcaagtacatgatgaactggtcttt
gaaattcctgaagcccgggtcacggaagcctctgcagtaattaaatctacaatggaagct
gcatgtgaaccgattttagaaatggccgttcctctagttgttgatgtaggggtcggcgat
gactgggaagaggcacattaa

DBGET integrated database retrieval system