Temperatibacter marinus: QGN29_05415
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Entry
QGN29_05415 CDS
T09370
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tmk
Temperatibacter marinus
Pathway
tmk03030
DNA replication
tmk03410
Base excision repair
tmk03420
Nucleotide excision repair
tmk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QGN29_05415 (polA)
03410 Base excision repair
QGN29_05415 (polA)
03420 Nucleotide excision repair
QGN29_05415 (polA)
03440 Homologous recombination
QGN29_05415 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmk03032
]
QGN29_05415 (polA)
03400 DNA repair and recombination proteins [BR:
tmk03400
]
QGN29_05415 (polA)
Enzymes [BR:
tmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QGN29_05415 (polA)
DNA replication proteins [BR:
tmk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QGN29_05415 (polA)
DNA repair and recombination proteins [BR:
tmk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QGN29_05415 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QGN29_05415 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WND03812
UniProt:
A0AA52EE69
LinkDB
All DBs
Position
complement(1191493..1194273)
Genome browser
AA seq
926 aa
AA seq
DB search
MTDATPHLYLVDGSGFIFRAYHAIRPGSMNRPDGTPVNAVYGFSSMLFKLLQDLRDGERP
SHLAVIFDAAKKTFRNDIYPEYKAHRPPAPEDLVPQFSIIREAVEAFGVKSLEMPGYEAD
DLIATYAVQARKKGWDVTIVSSDKDLMQLVDQGTTMFDSMKNKRIGIDGVHEKFGVGPEK
VIDVQALAGDSADNVPGVPGIGVKTAAQLINDYGDLDTLLDRAAEIKQNKRRENLLEFAD
QARISRDLVTLKVDCPITDDLETMAVKNPVAEDLLSFIDTQSFRSLRTKVINHYGADLED
TAHQAADNEIEKIETDYSCITTLDDLSLWIEAAYSAGVIAVDTETTGLDATAVDLVGISL
SIDAGKACYIPLAHKGDSDDMFAVPPTQIDKAKALAALKPLFEDESVLKIGQNMKYDMTI
LAREGIAVSPIDDTMLMSYALDAGRHGHGMDELSGINLDITPVAFKEIAGTGKNQKTFDL
IPLKEATHYAAEDADLTGRLARILKPRLAAEKVRTVYETLERPLVKVLSDMEQAGIKVDG
AELRRLSNEFAEGIQRLEIDIHDLAGRPFNIASPKQLGEILFEDMGLKGGKKSKTGAFST
NVDVLEKLAGEGVDIAQKVIEYRQFAKLKSTYTDALVGQINPATGRVHTSYSLASTTTGR
LSSNDPNLQNIPIRTSEGRKIRRAFIPEEGHKLVAADYSQIELRILAHMADIQALKDAFH
EGIDIHAMTASQVFGVPVEGMDPMVRRNAKAINFGIIYGISAFGLARQLGISRKEAQGFI
DAYFARFPGIRAYMDETIEFAKEKGHVETLFGRKVHIGAIQEKNPMRRQFGERAAINAPI
QGTAADVIRRAMIQMPPALERAGLLPDVKMLLQVHDELVFEIPEARVTEASAVIKSTMEA
ACEPILEMAVPLVVDVGVGDDWEEAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgcgacaccgcatctctatcttgtagatggatctggatttatcttccgagcc
tatcacgccataagaccgggcagtatgaacagaccggacggaactcctgtgaatgctgta
tatggcttttcaagcatgctgtttaaactgctacaagatttaagagatggagagcgtccc
tctcacttagccgtgatctttgatgcggcaaaaaaaacttttagaaatgatatctatcca
gaatataaagcccaccgcccacctgcacccgaagatttagtgccacagttttctatcatt
cgtgaagccgttgaagcctttggggttaaatctttagaaatgccaggctacgaagctgat
gatctgattgcaacttatgctgtgcaagcccgcaaaaaaggctgggatgtgacaatcgtt
tcaagtgacaaagatttgatgcagcttgttgatcaggggacgaccatgtttgacagcatg
aagaacaaacggatcgggattgatggagttcatgaaaaatttggtgtaggcccggaaaaa
gtgattgatgttcaggcgcttgccggtgacagtgctgataatgtgcctggcgtacctggt
atcggcgtcaaaacagcagcccaacttatcaatgactatggggatttagatacacttcta
gatcgtgctgcagaaattaaacagaataagcgcagagagaaccttctagaatttgctgac
caagcgcgcatcagccgcgatcttgtgactttaaaggtcgattgcccgatcactgatgat
ctcgaaacaatggctgtaaaaaacccagtggccgaagacctgctctcattcattgacacc
caatcttttagaagtttacgcacaaaagtgattaatcattacggcgctgatcttgaagac
acggcacatcaagccgcagacaatgaaattgaaaaaatcgagactgactatagctgcatc
accactcttgatgacctctcgttgtggattgaagctgcttattcagcgggcgttatagct
gttgatacagagactacaggcttagatgctactgcggtcgatttagttgggattagtcta
tccatagacgcaggcaaggcttgctatattcctcttgcccataagggggatagtgatgat
atgtttgcagtgcctccaacacaaattgataaagccaaagccctcgcggccttgaaacct
ctctttgaagatgagagcgttttaaaaattggccaaaacatgaaatacgatatgacgatt
ctcgcccgagaaggtatcgctgtctctccgatcgatgatacgatgcttatgtcttacgcc
ctcgatgccggtcgtcatggtcacgggatggatgaactatcaggcataaatttagacata
actcccgttgcctttaaagagatagcgggcacaggtaaaaatcaaaaaacattcgacctt
atcccactgaaagaagccacccattatgctgctgaagatgcagatctaacaggacgtctt
gctcgcattctgaagcctcgacttgctgctgaaaaggtcagaaccgtttatgaaacgctt
gagcgcccacttgtgaaagtcctctcggatatggaacaggctggaataaaggtagacggc
gcggaactaagacgcctcagtaatgaatttgctgagggtatacagcgcttagaaattgat
attcatgatctggcagggcgcccctttaatattgcctctcccaaacaacttggcgaaatc
ctatttgaggatatgggcttaaaagggggtaagaaatctaagacaggggccttctctacc
aatgttgatgttttagaaaaacttgctggtgaaggcgtagatattgcacaaaaggttatc
gaataccgtcaatttgcaaaactgaaaagcacctatactgacgcgctggtgggacaaata
aatcctgcaacaggtcgtgttcacacaagttattcactggccagcaccaccacaggccgc
ctatccagtaatgatccaaacttacagaatattccaatcagaaccagtgaaggccgcaaa
attcgaagagcttttatccccgaagaaggccataagctcgtcgccgcagattacagccaa
atcgagctacgcatcttggcccatatggcggatattcaagctcttaaagacgcctttcat
gaaggaattgatattcatgccatgaccgcctcacaagtgttcggcgtccctgtagagggc
atggaccctatggtgcggcggaatgccaaagcaattaactttggtattatttacggcatt
tcggcctttggacttgcccgtcaattagggatcagtcgtaaagaagctcaaggttttatt
gacgcttattttgcacgcttccccggcattcgggcctatatggatgaaaccatagaattc
gcaaaagagaaagggcacgttgaaaccctatttggacggaaagtccacatcggcgctatc
caagaaaagaatcctatgcggcgtcaatttggtgagcgcgcagcgattaatgcccctatc
caagggactgccgctgatgtgatccggcgggcaatgattcaaatgcctcctgcccttgag
agagcaggcctcctccccgatgtaaaaatgctactgcaagtacatgatgaactggtcttt
gaaattcctgaagcccgggtcacggaagcctctgcagtaattaaatctacaatggaagct
gcatgtgaaccgattttagaaatggccgttcctctagttgttgatgtaggggtcggcgat
gactgggaagaggcacattaa
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