Temperatibacter marinus: QGN29_06045
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Entry
QGN29_06045 CDS
T09370
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
tmk
Temperatibacter marinus
Brite
KEGG Orthology (KO) [BR:
tmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmk03400
]
QGN29_06045 (addB)
Enzymes [BR:
tmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QGN29_06045 (addB)
DNA repair and recombination proteins [BR:
tmk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QGN29_06045 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WND03933
UniProt:
A0AA52EIT6
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All DBs
Position
1350801..1353806
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AA seq
1001 aa
AA seq
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MFPSRPDIYTISPDLPFADTLAEGMIERFQTGHEFALSDCLILVPNRRAVRSVREAFIKV
AGRKPILLPSIRAIGDVDEEEMEFLSSDIAFDIASIPPSIRAKERQSLLMVQVERWMKLN
QRIDLAPAQSWRLAGELMRFMDQVETEGLSYEGLVDLVAEDFAKHWQITLDFLKIITNFW
PAILEEAGQINPAARRDKLMKALIRSWDKKPPKGPVLVAGSTGTIPATRALIKAVLKLEK
GWVILPGIDQDMSREAWQSLSAHPSHPQHVMHTLLDSLQLEREDVLEWQGTNDISLKCQL
MRDVMLPSSALGEWQNSPWTRDKAQAQAASQGLSVLVCPTRREEATTIALIMRETLEIAG
KTAALVTPDRLLATHVKSILKRWDIRVDDSAGDPATISQTGAFLQLFADLFAADFSPITL
LAFLQHPFMSMEMLRSDYRQFVRHLDRYVLRGPRPTSGLVGLKKYAAQKTSDKRHPFPKK
DYRSLTLFIELVEPIALAFDQGHRFADCLKEFIRVAEKLATSPDQEGADQLWRGDAGEAL
AIAISDMISECQSLPAYPAFEFAPLLKEMIKRETIRPKFGAHPRLSIWGTMEARLQRTDV
MVLGSVNEGTWPAETQADPWMSREMRHLFGLPALDRKIGQSAHDFMQAICADTVYISRAE
KVDGSPTVPSRWLLRLEALLGFLPEAKKPYLLWAEQLDQVGTYEPVQPPTPRPPVSARPR
ELSVTQVETWMRDPYTLYASKILGLSKLDSVDAKPSAADKGTLIHACLERFLKEKGAETG
QAGVDRLLSIGREVFSAYLLMPSVYAFWWPRFEQIAGWFVAWQEERRGKINPVAIEERGL
VELRGLNFKLKAFADRIDQTIQSDAYEIIDYKTGQPPTPKRVLAGYAPQLPLEGFIIQQG
GFPSLKPGRIASLTYIHLKGGLEVAESKRPVKDVEGAILQAEEGLRHLIEIFDQRETPYL
ASPRADITGYGEYDQLARVKEWQNGLGASLESISREGDENG
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgtcgcggcctgatatttatacgatttccccagacctccctttcgctgatacc
cttgcagaagggatgattgaacggtttcagacagggcatgaatttgccttatctgactgc
cttattctggtgcccaatagacgagctgttcgatcggtaagagaagctttcataaaagtg
gcgggcagaaagcctattttattgccttctatccgagccatcggagatgtggacgaggaa
gagatggaattcttgagcagcgacattgcctttgatatcgctagcattcccccatctatt
cgagccaaggaacgccaatccctactgatggttcaagtcgagcgatggatgaagctgaac
caacgcatcgatcttgctccggctcaaagttggcgattggcaggcgagttaatgcggttt
atggatcaagtcgaaacagaaggcctatcatacgagggattggtagatcttgtagctgaa
gactttgcaaagcattggcaaattactttagattttttaaaaattattactaatttttgg
ccggctattcttgaagaagcagggcagattaatccagctgcgcggcgcgataaactgatg
aaggccctcatccgttcatgggataaaaaacccccgaaagggcctgttctagtggcaggc
tccacagggacaattccggcaacacgggccttaattaaagctgtacttaaattagagaaa
ggctgggtcatcttgcctggtattgatcaagacatgagtagagaagcatggcaaagtcta
tcagctcatccttctcatccacagcatgtaatgcatactctattggacagcttacagcta
gagagagaagatgtcctagagtggcaggggactaatgatatcagtttgaaatgtcaatta
atgcgtgatgttatgcttccaagttcagctctgggtgagtggcaaaatagcccctggacg
agagataaggcccaagcccaagcggcctcacaaggcctgtcggttcttgtctgtcccacc
cgacgagaagaggcaacgaccatcgctttaatcatgcgtgaaacgctagaaattgcaggc
aagactgctgcattagtgaccccggatcggttgttggcaacgcatgttaaatcgatttta
aagcgttgggatattagagtagatgatagtgcgggtgaccctgcaaccatcagtcaaaca
ggagcctttctccaactctttgccgatctatttgccgcagacttctcaccgataaccctt
ttagctttcttgcagcacccctttatgagtatggaaatgctccggtcagactatcgtcaa
tttgtacggcatcttgatcgatatgttcttcgcggaccacgcccaacgagtggtcttgtc
ggcctgaaaaaatatgcggcgcaaaaaacttctgataaacgtcatccattccctaaaaaa
gactacagaagcctgactctcttcatagagctggttgagccaattgctcttgcttttgat
caagggcatcggtttgcagattgtttaaaagaatttatccgggtggcagaaaagttggcg
acaagccctgatcaagaaggggctgatcaattatggcgcggcgatgcaggagaggctttg
gcgatagcgatttctgacatgatcagtgagtgccagagtctgcctgcttatcctgccttt
gaatttgcaccgttgctgaaagaaatgataaaacgagaaacgatccgtcctaagtttggg
gctcatcctcgactctcaatatggggaacaatggaggctagattacagcgcacggacgtg
atggttttaggcagcgtcaatgagggaacctggccggcagaaacgcaagcagatccttgg
atgagtagagaaatgcggcacttgtttggcttgcctgcgcttgaccgaaagattggccaa
agtgcgcatgacttcatgcaggcgatttgcgctgacacagtctatatctcgagagcagaa
aaagttgatggcagcccaactgtaccaagtcgatggcttttgaggctggaggctcttctt
gggtttttaccagaagcaaaaaaaccttatcttttgtgggcagaacaattggatcaagtt
gggacctatgaaccggttcaaccaccaacccctagaccgcctgtttcagcaagaccgaga
gagttgtctgtgacacaggttgaaacgtggatgcgtgatccttatacgctctatgcgagc
aagattctgggcttgtcgaaattagactctgtggatgctaagcccagtgcagcagataaa
ggaaccctcattcatgcatgcctagagcgattcttaaaagagaagggtgctgaaacaggt
caagcgggagttgacagacttttatccataggacgagaggtctttagtgcttatctgtta
atgccttctgtctatgctttttggtggccgcgatttgaacagatcgcgggctggtttgtc
gcatggcaagaggaacgccgaggaaaaataaatcccgtcgctatagaagaacggggcctt
gttgagctgagagggctgaactttaagcttaaggcttttgccgatagaatcgatcagact
attcagtcggacgcatatgaaataattgactataagacaggccagccaccaaccccaaaa
agagtgttagctgggtatgcgccccaactgcctttagagggctttattattcagcaaggt
ggctttccctcgctaaaacccgggcgtattgcttcgttaacatatattcatttaaaggga
gggctagaagtcgctgaaagcaaaagaccagtgaaagatgttgagggcgccatcctgcag
gctgaggaaggactgcgtcatcttattgaaatattcgatcaaagggaaacaccctatttg
gctagcccgcgggctgatatcacaggatatggtgaatatgatcagctggcacgagtgaaa
gaatggcaaaatggccttggtgcctccttagaatctataagccgagagggggatgagaat
ggttaa
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