Temperatibacter marinus: QGN29_07245
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Entry
QGN29_07245 CDS
T09370
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tmk
Temperatibacter marinus
Brite
KEGG Orthology (KO) [BR:
tmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmk03016
]
QGN29_07245 (truB)
Enzymes [BR:
tmk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QGN29_07245 (truB)
Transfer RNA biogenesis [BR:
tmk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QGN29_07245 (truB)
Prokaryotic type
QGN29_07245 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WND01356
UniProt:
A0AA52H7R5
LinkDB
All DBs
Position
1605982..1606896
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AA seq
304 aa
AA seq
DB search
MGRKRKGEKLDGWIIIDKALNLSSSQVVGKVRWLTKAQKAGHAGTLDPLATGVLPIGLGE
ATKTMPFIVDASKTYEFKMKWGSSTTTDDLEGEVVDVSDVFPSKAELEAQLPIFTGLISQ
TPPIYSAIKVDGKRAYDLARAGEEVVLKSRLVQIDSIQILCHDSDSLETHLRVECGKGTY
IRSLARDIAEKCSSRAHVSYLRRTRVGPFQEKDAISLEKLEELSHSAPAQSLLLSLMTAL
DDIPVVAVSGSEAEDLSFGRQIKGELLQGAESVQGTVILVFDNRPVAIAETIETGFQPLR
VFNM
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaagcgcaagggtgaaaagctcgacggttggattattatcgataaagcgctg
aacctatccagtagccaggtcgttggaaaagttcgctggttaaccaaagctcaaaaagcc
ggacatgcagggacgttagacccgcttgcaacaggtgtgctgcccatcggacttggggaa
gcaacaaaaacgatgcccttcatcgttgatgcctcaaaaacatatgagtttaaaatgaag
tggggatcttccaccacgaccgatgatcttgagggcgaggttgttgatgtcagcgatgtc
tttccttcaaaagccgagctagaagctcagttgcctatttttacaggtcttataagtcag
acacctcccatctatagtgcaattaaagtagatggcaaaagagcctatgatctagcacgg
gcaggggaagaggtcgtcctcaaaagccgtctggttcaaatcgattcgatacaaatcctt
tgtcatgatagtgattcgcttgaaacacacctgcgtgttgaatgcggaaaaggaacatat
ataaggtcacttgcgcgggatattgctgagaaatgcagctctagagcgcatgtttcttat
ttgcggcgaacacgtgtgggcccttttcaggaaaaagatgcgatttcgctggaaaaacta
gaagaattaagccatagtgcgccggctcagagccttctgctctcgcttatgactgcactg
gacgacatcccggtggtagccgtaagtggaagtgaagcggaagatttatcttttggtcgt
cagatcaaaggagaattgcttcaaggtgctgagagcgtgcagggcacagtgattttggtt
tttgataaccgtccagtagcaattgctgagacaatcgaaaccgggtttcagcctctgcgt
gtcttcaatatgtaa
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