Temperatibacter marinus: QGN29_07255
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Entry
QGN29_07255 CDS
T09370
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tmk
Temperatibacter marinus
Pathway
tmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QGN29_07255 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmk03019
]
QGN29_07255 (pnp)
03016 Transfer RNA biogenesis [BR:
tmk03016
]
QGN29_07255 (pnp)
Enzymes [BR:
tmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QGN29_07255 (pnp)
Messenger RNA biogenesis [BR:
tmk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QGN29_07255 (pnp)
Transfer RNA biogenesis [BR:
tmk03016
]
Prokaryotic type
tRNA degradation factors
QGN29_07255 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
Rv2993c-like_N
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
WND01358
UniProt:
A0AA52H976
LinkDB
All DBs
Position
1607421..1609604
Genome browser
AA seq
727 aa
AA seq
DB search
MFNITREEIQWGDSTLVLETGHVARQATGAVMASMGETTVLCTVVGARSPKPGQDFFPLT
VNYQEKFYAAGKIPGGYFKREGRPTEAETLICRLIDRPIRPLFPEGFKNEVQVICTVVSY
DGENQPDVVAMVGASAALTISGIPFMGPIGCARVGYKDGEYILNPSKEALEDSELDLVVS
GTHDAVLMVESEANELSEDVMLGAVVYGHDQQQAVINGIINLAEKCAKEPWDLAEAPEWK
EEKAEIAKIGEAGLRDAYATVDKVDRVAKISAVKADVAAAFEARIADENSPMTGVIMGDL
VKKLEKDIVRGDIIKTGKRIDGRKLDDVRDIEAQAGVLPRAHGSALFTRGETQGLVVATL
GTSDDVQYVDSLDGTNKNGFMLHYNFPPYSVGECGRLGGAGRREIGHGKLAWRAVHAVMP
EDDSFPYTIRLVSEITESNGSSSMASVCGASLAMMDAGVPIKRPVSGIAMGLIKEGDDFA
VLSDILGDEDHLGDMDFKVAGTEKGLTALQMDIKITGITREIMEVALEQAGRGRGYILDE
MSKGLSGTRTEMSAHAPRIETMKIPVDKIREVIGTGGKVIREIVEQTGAKVSIEDDGTIN
IASSNAEEIDAAKAWITGIVAEPEVGVIYKGKVVRLMDFGAFVNFMGSKDGLVHISELKE
ERVENVTDVVKEGDEVYVKCLEIDPRGKVRLSMRVVDQETGETDPNAAPPKEAPKGGGKR
GPRRPRD
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatattacaagagaagaaattcaatggggtgatagcacccttgttttagaaact
ggccacgttgcgcgccaggcaaccggtgctgtaatggcatctatgggtgagaccacagtc
ctttgtactgttgttggtgctcgctctccaaaaccaggtcaggactttttccctctgacc
gttaactatcaagaaaaattctatgctgcgggtaaaattcctggcggctatttcaagcgt
gaaggacgtccgactgaagcagagacactgatctgccgtttgattgaccgtcctatccgc
cctctttttccagaaggtttcaaaaacgaagttcaggtgatctgtacggtcgtttcttat
gacggtgaaaaccaacctgatgttgttgctatggtcggcgcttctgcagccctaacaatt
tcgggaattccattcatgggcccaatcggttgtgcgcgggttggatataaagatggtgaa
tatattcttaacccaagtaaggaagcactagaagatagtgagcttgatcttgttgtttct
ggaacacatgacgccgttcttatggttgaatcagaagcgaatgagctttctgaagatgtg
atgctaggtgcagtggtttatggccatgaccagcagcaagctgtcatcaatgggatcatt
aatcttgcagaaaaatgtgccaaagaaccttgggatcttgctgaggcgccagagtggaaa
gaagaaaaagctgagattgctaaaatcggtgaagctggccttcgtgatgcctatgctact
gttgataaagtagaccgtgtggctaagatttctgctgttaaagccgatgttgccgctgcc
tttgaagcccgtatcgcagatgagaacagcccaatgacaggcgtgatcatgggcgacttg
gttaagaagcttgagaaagatattgtacgcggtgatatcattaaaactggtaagcgtatt
gatggtcgtaaacttgacgatgtgcgtgacattgaagcacaagctggtgtccttcctcgt
gcccatggttctgccttgtttacacggggtgaaacacagggtcttgttgtcgcgacactt
ggaacttccgatgacgttcaatatgttgatagtttagatggcactaataaaaatggtttc
atgcttcactataacttccctccttactctgtaggtgagtgtggtcgtcttggtggcgca
ggccgtcgcgaaattggccatggtaaattggcatggcgtgctgttcatgcagtaatgcct
gaagatgatagcttcccttatacaattcgccttgtttctgaaatcacagaatctaatggg
tcttcttcgatggcatctgtatgtggtgcctccctcgctatgatggatgccggtgttcca
attaaacgccctgtctctggtattgcaatgggtctgatcaaagaaggcgatgattttgct
gttctttctgatatcctaggtgacgaagatcatcttggtgatatggactttaaagttgcg
ggcaccgaaaagggcctgacagcacttcagatggatattaagattacaggtattacacga
gaaattatggaagttgctctggagcaagctggccgtggtcgcgggtatatccttgatgaa
atgagcaagggcctttccggtacacgtactgaaatgtctgctcatgctcctcgtatcgaa
accatgaaaattcctgtggacaaaattcgtgaagtgattggtactggcggtaaagtgatc
cgtgaaatcgttgagcaaactggtgctaaagtgagcattgaagacgatggtacaatcaac
attgcttcttcaaatgctgaagaaattgatgcagctaaagcttggattacaggcattgtt
gctgaaccagaagtgggcgttatctacaaaggtaaagtagttcgcttgatggattttggt
gcctttgtgaacttcatggggtctaaagatggtcttgtgcacatctctgagcttaaagaa
gagcgcgtagagaatgtgacagacgttgtcaaagaaggcgacgaagtttacgtcaagtgt
cttgaaattgatcctcgcggaaaagtacgtctttctatgcgtgtggttgaccaagaaact
ggtgaaactgatccgaatgcagcgcctccaaaagaagcgcctaaaggtggtggaaaacgc
ggtccgcgtcgtccacgtgactaa
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