Temperatibacter marinus: QGN29_08470
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Entry
QGN29_08470 CDS
T09370
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
tmk
Temperatibacter marinus
Pathway
tmk00470
D-Amino acid metabolism
tmk00550
Peptidoglycan biosynthesis
tmk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tmk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QGN29_08470 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QGN29_08470 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tmk01011
]
QGN29_08470 (murD)
Enzymes [BR:
tmk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
QGN29_08470 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
tmk01011
]
Precursor biosynthesis
Amino acid ligase
QGN29_08470 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
TrkA_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
WND01592
UniProt:
A0AA52EA98
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All DBs
Position
1903482..1904858
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AA seq
458 aa
AA seq
DB search
MIVPVTYEGKNVAVFGLARTGITAVNALRAAGAKVFAWDDDSARCAEVGSVAHNLYALDF
KVLDYLMLAPGVPLTHPKPHALVEKAKRAGVPIMGDFDLFAAGQATLSAHKTVAITGTNG
KSTTTALVTHMIREAGMPVAMGGNIGTGVLSLPALEKGGVYVLEMSSYQIDLTHHFKPDI
AVLLNITPDHLDRHGDMSGYVLAKARLFELLHSDGLAVMSLDDSYSQSLAVTVGDKDGRL
KTITVEEKEMKDGIRILDEILFEVKNNRPCVVGSVSKCQMLKGHHNWQNMATAYAIGLEL
GIRPEQILVSFRTFAGLSHRQEFVGKINGISFINDSKATNLVSALKALESFKNIHWIAGG
RTKDEELTLSSVPFSHLKAGYFIGEAASFFVGEFDDLFPVSNQESLDQALRAAFEQADNG
DVILLSPACSAFDQFKDFEERGASFKSTFHALKEEYAS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttccagtaacatatgagggaaaaaacgttgcagtatttggtctggctcggact
ggaattacagccgtaaatgccttacgtgcagctggggcaaaagtcttcgcctgggatgat
gattctgctcggtgtgcagaagttggctctgttgctcacaacctttatgcacttgatttt
aaagttctggattatttgatgttggcaccgggtgtgcctctcacacacccaaagccccac
gctcttgttgaaaaagctaaacgagcaggtgtgcccattatgggtgattttgatttgttt
gccgcaggacaagcgaccttgtctgctcataaaacagttgccattacaggcactaatggc
aaatcaaccacaacagcccttgttacccacatgatcagggaggcaggcatgcctgtggcg
atgggcggcaatatagggacgggggtactttcccttccggccttggaaaaaggtggtgtt
tatgttttggaaatgtcttcttatcagattgatctaactcaccatttcaagccggatata
gcagttttattgaatatcacccctgatcatcttgatcgccacggtgatatgagtgggtat
gttctcgcaaaggcaaggttgtttgagttattgcattctgacgggcttgctgtgatgtca
ctggatgattcctactctcagagtttggctgttacagtgggcgataaagacggccggttg
aagacgattacagttgaagaaaaagaaatgaaagacgggatcagaattcttgatgagata
ttatttgaggtgaaaaataaccgcccatgtgtggtggggtcagtctcaaaatgtcagatg
ttaaagggtcaccacaactggcaaaacatggcgactgcctatgctattggacttgaactt
ggtattcgaccagagcaaatattagtcagcttcagaacttttgcgggcctttcacatcgc
caagaattcgttggcaaaataaacggcatcagttttattaatgatagcaaagccacaaat
cttgtttctgcgctgaaggctctagaaagttttaaaaatattcactggattgcaggaggg
cgcacaaaggatgaagagttaactctctcttctgttcctttttcccaccttaaagcgggc
tatttcattggtgaagctgcgtcgttctttgttggggaattcgatgacctttttccggtt
tcaaatcaagagtcacttgatcaagccctaagggctgcgtttgaacaggcggataacggg
gatgttattttgttatcaccagcctgtagtgcttttgatcaatttaaagattttgaagaa
cgcggtgcttcttttaaatcaacgtttcatgccttgaaagaggagtatgcatcatga
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