Temperatibacter marinus: QGN29_11535
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Entry
QGN29_11535 CDS
T09370
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tmk
Temperatibacter marinus
Brite
KEGG Orthology (KO) [BR:
tmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmk03016
]
QGN29_11535 (rnd)
Enzymes [BR:
tmk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
QGN29_11535 (rnd)
Transfer RNA biogenesis [BR:
tmk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QGN29_11535 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
WND02182
UniProt:
A0AA52H963
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All DBs
Position
complement(2571731..2572879)
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AA seq
382 aa
AA seq
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MKYITHSSDVELVCKRLSDSDFVTVDTEFLRDNTYYPKLCLIQVADDQDAHAIDPLADGI
DLSAFWELMRNEKVIKVMHACRQDMEIFFNEMQSLPKPIFDTQVAASVCGFGDSVGYETL
VNKIAKKSIDKSSRYTDWSRRPLTDKQLDYAIGDVTHLRKVYRFLDKRITERERSDWMQD
ELGILTSVETYDIDPTKVWQRVKVRTNNPRFLGILIKIAEWRERQAIDRNIPRNRVCKDD
VLLEICAHPPKVAEDLDKIRGLSKGFSRSKAGQTLKTYIDAALEVSDEDLPKLDRNKPRK
QPPPMVDLLKVLLKIRCNEVGVAPRLVASAAEIETLATNPEADIRPVQGWRMDVFGKDAL
AMINGKMALTARDGQITVVEVD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatattacccattcttctgacgtagaacttgtttgtaaaagactatctgactct
gactttgtcactgttgatacggaatttttgagagacaatacttattatccaaagctgtgc
ttaattcaagttgctgatgatcaggatgctcatgcaattgatcctttggcggatggcatt
gatctatcggctttttgggaattgatgcggaatgaaaaagtcatcaaagtgatgcacgcg
tgccgtcaggacatggaaatcttttttaatgagatgcaatcccttccaaaaccaatcttt
gatacacaagttgctgccagtgtttgtggatttggtgattctgttggctatgaaaccctt
gtgaataagatcgcaaagaaatcaatcgacaaatcatctcgttatacggactggtcgcgg
cgccctttaaccgataagcaattggattatgcgattggtgacgtgacgcatctgagaaaa
gtctatcgcttcttagataagcgtattacagaacgcgaaagaagtgactggatgcaggat
gaacttggtattctcacaagtgtagagacctatgatattgatccaaccaaagtatggcaa
agagttaaagtcagaaccaataaccctcgatttttggggatcctaataaaaatagctgaa
tggcgcgaacgtcaagccatagatcggaatattcctaggaatagagtgtgtaaagatgat
gtgttacttgaaatctgtgctcacccgccaaaagtagcagaagatctagacaaaatccgt
gggctttcaaaaggttttagtcgctcaaaagctggccaaactctaaaaacctatattgat
gccgcccttgaggtgtctgatgaagacctgccaaagcttgaccgtaataaaccacgtaag
caaccacctcccatggtagatcttctcaaggtgctgctcaaaatcagatgcaatgaagtc
ggtgttgccccacgtcttgtcgcgtctgccgcagaaattgaaactctggctacaaatcca
gaagccgatattcgccccgttcaaggatggcgtatggacgtctttggtaaagatgctctt
gccatgataaatggcaagatggctctgacggcacgggacggtcaaatcaccgttgtggaa
gttgactaa
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