Temperatibacter marinus: QGN29_12615
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Entry
QGN29_12615 CDS
T09370
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tmk
Temperatibacter marinus
Pathway
tmk03030
DNA replication
tmk03430
Mismatch repair
tmk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QGN29_12615 (dnaE)
03430 Mismatch repair
QGN29_12615 (dnaE)
03440 Homologous recombination
QGN29_12615 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmk03032
]
QGN29_12615 (dnaE)
03400 DNA repair and recombination proteins [BR:
tmk03400
]
QGN29_12615 (dnaE)
Enzymes [BR:
tmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QGN29_12615 (dnaE)
DNA replication proteins [BR:
tmk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QGN29_12615 (dnaE)
DNA repair and recombination proteins [BR:
tmk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QGN29_12615 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
HHH_3
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WND02393
UniProt:
A0AA52HAA4
LinkDB
All DBs
Position
complement(2791914..2795435)
Genome browser
AA seq
1173 aa
AA seq
DB search
MSDTHAQFVHLRVHSAYSLAEGAIHAKDLIKQSLGLGFPAVAMTDTNNMFGAMDFSMAGT
GAGVQPIVGVQLSIRNSYLTVDPKARSKPEPDQLVLLSMNREGYGNLMKLVSKAHLESDA
SEGPQILIEDMQGLSENVICLTGGSKGPVNTLVLKDQRSDASECLDQLKDLFGDRLYVEL
QRHGLEEEEASEEALLDMAYEKNIPIVATNECFFVGPDMYEAHDALLCIADGAYVDETDR
RRVTPEHRLKSAEEMINLFKDLPEAIENTLYISKKCLFKVDPIDPLLPNFTEGQDISEAD
MLRDEAIKGLRMRLDFKAAQEGLAAGKEEEWEKEYWERLDFELGIINQMGFPGYFLIVAD
FIQWSKDNNIPVGPGRGSGAGSVVAWVLKITDLDPLRFSLLFERFLNPERVSMPDFDIDF
CQDKREQVIKYTQDKYGADKVAQIITFGKLQARAVVKACGRVMQQPYPVTDRLAKLIPND
PGSAMTLAEAVESEERFKAEIEADEQTALVVDRALKLEGFYAHSSTHAAGVVIGDRPLDQ
LVPLYRDPKSDMPVTQFNMKFVEQAGLVKFDFLGLKTLTVLQRAVEYVAERDIEIDLEAL
PLDDKKSYELLASGNAAGVFQLESTGMRAVLKGLKPDLFEDIIAVVALYRPGPMANIPTY
VERKHGREEVTYKHPMLEDILSETNGIFIYQEQVMELAQKMAGYSLGQADLLRRAMGKKI
KEEMDKQVEIFVEGAKERGVTDPVARAIFDEVMAFASYGFNKSHAAAYALVAYHTAYMKA
NYPVEFMAAIMTLDLGNTDKLAGFKQELQRMEVPLLLPNINKSQVAFVVEKSEETYCEDL
DDPRHNLAIRYALGAIKGVGEKAMEAIIEEREKNGAFTDLFDFAERIDPKLMNKRQMERL
AAAGAFDCLLDSRSQANAAADVVMRYANMMAAERASNQVSLFGDDASAQVDRPALPVVRN
WTPTEELEHERKAVGFYISAHPLDSYEKILERESIISAAEVFSDPGLIGQTVRMAGAILS
YRESKSKNTGRKFGALMLSDRTDAFEFLIFEDDLPRTRELVEEGAPLVVNIQIKKKDDED
MVRLGSRGMDSLESVAAQSSSGLEIEVEDQDAIKSIKSVLSRRSGGKGIVKIKVPVEEDK
RFAEFKLPHKYKISPELIQAIEAEIGVSSVMEQ
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacacacatgcacaatttgtacacctgcgggttcattcggcttattctcttgct
gagggtgcgatccatgccaaagacctcattaaacagagtttaggcctaggatttcccgcg
gtcgccatgacagatacaaacaacatgtttggggccatggacttttcgatggctggcaca
ggcgcaggggtgcaaccaattgtcggtgttcaactctctatccgaaacagttatcttaca
gttgatccaaaggcccgctcaaaaccagaaccagatcagcttgttcttctctcaatgaat
agagaaggctatggcaatttaatgaagcttgtctctaaagctcatctggaaagcgatgct
tctgaaggaccgcagatcttgatagaagatatgcaaggattatcagagaatgtgatttgt
ttaacaggtggttctaaggggcctgttaatacacttgtcttgaaagatcagcgaagtgat
gcatctgagtgcctcgatcaattaaaagatctctttggagatcgcctttatgtggaactt
cagcgtcatggattagaagaagaggaggcttctgaagaggcgctccttgatatggcttac
gaaaagaacattccaattgtggcgactaatgaatgtttctttgtaggccccgatatgtat
gaagctcatgatgcacttctgtgtattgcagacggcgcttatgtggatgaaactgacagg
cgtcgtgttacaccagagcataggcttaaatcagctgaagagatgataaatctctttaaa
gacttgccagaagctattgaaaatactttatatatttctaaaaaatgcctcttcaaagtt
gacccgattgatcctcttctaccaaactttactgagggtcaagacatttcagaagcagac
atgctgagagatgaggctattaagggcttgcggatgcgccttgattttaaggcggctcaa
gaaggtttagccgctggcaaggaagaagaatgggaaaaggaatattgggagcgcttagac
tttgaattaggcatcattaatcagatgggctttcctgggtatttccttattgttgcggat
tttattcagtggtcaaaagataataatatacctgtagggcctggtcggggatccggtgct
ggttccgttgttgcatgggtgctaaagattacagacttagatccactgcgtttcagtttg
ctatttgagaggttcctaaaccctgagcgtgtatctatgcctgactttgatatcgatttt
tgtcaggataagcgcgagcaggttattaaatatacccaagataaatacggtgcagacaaa
gtcgctcaaattattacatttggtaaacttcaagcccgtgcggttgtgaaagcttgtggg
cgtgtaatgcagcaaccttatcctgttactgatcggcttgcgaaattaattcccaatgat
ccgggaagcgcgatgacactggcagaagccgtcgaaagtgaagagcgttttaaggctgag
attgaagcagatgagcaaacagctctcgttgtggacagggcactgaaattagaaggattc
tacgcgcattcctcaactcatgctgctggcgttgtcattggtgatcgtcctctagatcaa
ttggtacctctttatcgggatccaaaatctgacatgccagtaacgcagtttaacatgaag
tttgttgagcaggcaggacttgtgaagtttgatttcttgggattgaaaacactgactgtt
ctccaacgcgcagtggaatatgttgctgagagagatattgagattgatctagaggccctt
cctcttgatgataagaaaagttatgagcttttggcttctggcaatgctgcaggcgtcttt
caattagagagtacgggtatgcgtgctgtccttaaagggctaaagcccgatctatttgaa
gatattattgcggttgttgccttatatcgccccggtcctatggccaatatccctacctat
gtagaacgcaaacacggccgcgaggaagtaacctataagcatccgatgcttgaagatatt
ctatcagagacaaatggcattttcatttatcaggaacaagtgatggaactggcccagaaa
atggctggatatagcttgggtcaggcggacttattacgccgcgcgatgggtaaaaagatt
aaggaggagatggataaacaagtcgagatttttgttgaaggggctaaagagcggggtgta
acagaccctgtggcacgggccatttttgatgaagtaatggcttttgcttcttatgggttc
aataaatctcacgcagctgcctatgctttagttgcttaccacacagcttatatgaaggct
aattaccctgttgaatttatggccgccattatgacgctcgatttaggtaatacagataaa
cttgcaggctttaaacaagagctacaacgtatggaggtgcccctattgctgcctaacata
aataagtctcaagtagctttcgttgtggaaaaatcagaagaaacttactgtgaagactta
gatgatcctcgccataacttggccatacgctatgcgcttggggctattaaaggcgtcggt
gaaaaggcaatggaagccatcattgaagaacgtgagaagaatggcgcatttaccgattta
tttgactttgcagagcgcattgatccgaaactgatgaataaacgccaaatggagcgtctt
gcggcggcgggggcgtttgattgtttacttgacagtcggtcccaagcaaatgctgcagct
gatgtggttatgcggtatgccaatatgatggcagcggaacgcgcgagcaatcaagtcagt
ttatttggggacgatgccagcgcccaagttgaccgtcctgctttgcctgtggttagaaat
tggacaccgacagaggaattagagcatgaacgtaaagccgttggtttttatatatcagcg
catcccttggatagttatgaaaaaatccttgaacgagagagtattatttcagcagccgag
gtcttttcagatcctggcttgattggccaaacggttcgaatggctggagcgattctctct
tatcgagaaagtaaatcaaaaaatacggggcgaaaatttggcgcgttgatgttatcagac
agaacggatgcttttgaattccttatttttgaagatgatttgccgcgcacaagggaactt
gtagaagagggcgcccccttggtggtcaatattcagattaagaaaaaagacgatgaagat
atggtcaggcttggctcgcgcggtatggatagcctagaaagtgtggcggcacagtcctct
agtgggttagagattgaagtggaagatcaagacgctattaagtctataaaatcagtactt
tccagacgttctggggggaaggggatcgttaaaattaaagtgcctgtagaagaggataaa
cggttcgcagaatttaagttgccccataaatataaaatatcacccgagcttattcaggca
attgaagccgaaatcggtgtatcaagtgtcatggagcaatag
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