KEGG   Tuber melanosporum: GSTUM_00000050001
Entry
GSTUM_00000050001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K11097  small nuclear ribonucleoprotein E
Organism
tml  Tuber melanosporum
Pathway
tml03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSTUM_00000050001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00000050001
   03041 Spliceosome [BR:tml03041]
    GSTUM_00000050001
   03032 DNA replication proteins [BR:tml03032]
    GSTUM_00000050001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     GSTUM_00000050001
Spliceosome [BR:tml03041]
 Complex A
  U1 snRNP components
   Sm proteins
    GSTUM_00000050001
  U2 snRNP components
    GSTUM_00000050001
 Complex B
  U1 snRNP components
    GSTUM_00000050001
  U4/U6.U5 tri-snRNP components
    GSTUM_00000050001
 Complex C
  U2 snRNP components
    GSTUM_00000050001
DNA replication proteins [BR:tml03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     GSTUM_00000050001
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 9188426
NCBI-ProteinID: XP_002835333
INRA: GSTUM_00000050001
UniProt: D5G4Q4
LinkDB
AA seq 93 aa
MASRGGGGGRRVLLPPINFIFKLLQSHATVQIWLYEQLAIRIEGKIRGFDEFMNLVIDDA
VEVKLKTKDEEESRRELGQILLKGDNVSLIQSL
NT seq 282 nt   +upstreamnt  +downstreamnt
atggcatctcgaggcggcggcggcggtcggcgcgtcctcctcccaccaatcaacttcatc
ttcaaactcttgcaatcccacgcaacggttcaaatatggctctacgagcaattagccatc
cgcatcgagggaaagatcagaggcttcgatgagttcatgaacctcgtcattgacgatgcg
gtggaggttaagctcaagactaaggacgaagaggagagccggagggaattagggcagata
ttactcaaaggggataacgtttcgttgatacagagtctgtag

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