Tuber melanosporum: GSTUM_00000050001
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Entry
GSTUM_00000050001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K11097
small nuclear ribonucleoprotein E
Organism
tml
Tuber melanosporum
Pathway
tml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTUM_00000050001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00000050001
03041 Spliceosome [BR:
tml03041
]
GSTUM_00000050001
03032 DNA replication proteins [BR:
tml03032
]
GSTUM_00000050001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
GSTUM_00000050001
Spliceosome [BR:
tml03041
]
Complex A
U1 snRNP components
Sm proteins
GSTUM_00000050001
U2 snRNP components
GSTUM_00000050001
Complex B
U1 snRNP components
GSTUM_00000050001
U4/U6.U5 tri-snRNP components
GSTUM_00000050001
Complex C
U2 snRNP components
GSTUM_00000050001
DNA replication proteins [BR:
tml03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
GSTUM_00000050001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
9188426
NCBI-ProteinID:
XP_002835333
INRA:
GSTUM_00000050001
UniProt:
D5G4Q4
LinkDB
All DBs
AA seq
93 aa
AA seq
DB search
MASRGGGGGRRVLLPPINFIFKLLQSHATVQIWLYEQLAIRIEGKIRGFDEFMNLVIDDA
VEVKLKTKDEEESRRELGQILLKGDNVSLIQSL
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcgaggcggcggcggcggtcggcgcgtcctcctcccaccaatcaacttcatc
ttcaaactcttgcaatcccacgcaacggttcaaatatggctctacgagcaattagccatc
cgcatcgagggaaagatcagaggcttcgatgagttcatgaacctcgtcattgacgatgcg
gtggaggttaagctcaagactaaggacgaagaggagagccggagggaattagggcagata
ttactcaaaggggataacgtttcgttgatacagagtctgtag
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