KEGG   Tuber melanosporum: GSTUM_00000064001
Entry
GSTUM_00000064001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K11360  transcriptional activator SPT8
Organism
tml  Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:tml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tml03021]
    GSTUM_00000064001
   03036 Chromosome and associated proteins [BR:tml03036]
    GSTUM_00000064001
Transcription machinery [BR:tml03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     GSTUM_00000064001
Chromosome and associated proteins [BR:tml03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     GSTUM_00000064001
SSDB
Motif
Pfam: Beta-prop_SPT8 WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_EML Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st WD40_2 Beta-prop_VPS8 Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 9188436
NCBI-ProteinID: XP_002835343
INRA: GSTUM_00000064001
UniProt: D5G4R4
LinkDB
AA seq 449 aa
MRWVFTGGSDGYIRRFDWFGSINGKVPLTVAQRHPFVDSVTRAGILLSYWENEEPIVAGK
PQVLHVPETTDDLKLSPVYSLAVQNQSLWLLSGLESGGINLQSVRHDEGKIITTLRKHNS
AVSVLTLANDEKSVLSGSWDGAVYDWDLNTGQSRREFPSSSGQISSVAFRPISTEWQEIR
NTSLINGVSGGRDGGLSNVEEDEMSRAITNGLGSDPVPLGDGSEDQRTNNGDAIMADDVT
RIHTNETSGTRNGSTNGGLGTANGFLPPTSTNGPPSSTDQNVFLASSMDGTLRIWDIREP
NPVAVSTPSKGVPPWCMNSCWSTNGNFLYAGRRNGTVEEFSVYKGIGEATRTMKFPLGSG
PISALTALPNGRHLICASFDNLRLYDLSENASKHSTVPFYIIPGHHGGVISSLYVDATGQ
YLISIAGNRGWEGVTTEVLLGYEIVSVLS
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgttgggtttttacggggggcagtgatggctatataaggcgattcgactggttcggg
agcatcaatggcaaagtgcccttgacagtcgcacagcgccaccccttcgttgatagtgtc
acaagagctggtattctgctatcttattgggaaaacgaagaaccgatagttgccggcaag
ccccaagtccttcatgtaccagaaacgaccgacgacctgaaattaagtccagtctacagt
ctggctgttcaaaatcagagcctatggctgctcagtgggctcgagagtggtggcataaac
ctccaatcggttcgacacgacgaaggaaaaatcataactacactccggaaacacaactca
gctgtcagcgtgcttacacttgccaacgatgagaagtctgttctttccggaagttgggac
ggagcagtctacgactgggatctaaatacaggccaatcccggcgagaatttccctcttcg
tcagggcagatatcaagtgtagcctttcgaccaatctctaccgaatggcaagagatcaga
aacacttctttgatcaacggtgtatccggggggcgggacgggggtttatccaatgtggaa
gaggatgagatgagtagagctattacgaacgggctcggcagtgatccagtccccttgggg
gatggcagcgaggaccaaagaaccaacaatggcgatgcgatcatggccgacgatgtcact
aggatacataccaatgagacgtccggaaccagaaacggttccaccaacggtggtcttggg
actgctaatggcttccttccacccacatcaactaacgggccgccatcttcaaccgaccag
aatgtgttcctagcatcttccatggacggcaccctccgtatatgggatatcagagagccc
aaccctgtagcggttagcacgccctccaagggagttccaccttggtgcatgaactcctgc
tggagcacgaacggaaactttctctatgcaggacgacgaaacggcacagttgaggaattc
agtgtctataaaggaatcggggaagcaacgaggaccatgaagttcccattggggagtggc
ccaatatctgcattgaccgccttgccgaacggaagacatttaatttgtgcatcatttgac
aacttacggttatacgaccttagtgagaatgcatcgaagcattcaactgtacccttctat
attataccaggtcaccacggaggtgtcatttcatcgttgtatgtcgatgctaccggccaa
tacctaatatcaattgccggaaaccggggttgggagggcgtaacaacggaagtccttcta
ggttatgaaattgtaagcgtgttatcgtga

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