Tuber melanosporum: GSTUM_00000241001
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Entry
GSTUM_00000241001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K18725
nucleoporin POM152
Organism
tml
Tuber melanosporum
Pathway
tml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTUM_00000241001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00000241001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTUM_00000241001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
9186323
NCBI-ProteinID:
XP_002835468
INRA:
GSTUM_00000241001
UniProt:
D5G540
LinkDB
All DBs
AA seq
1281 aa
AA seq
DB search
MSDGTPRIPAAFPRSPATGRARRVPHSPSPPARESPPRSVGAIVSTSMTSTIATGPKNNA
PPSMVQTRDVALPPLISLDTLDAPTQRLYAVGFFVLLQAWKFYDIARLYTTDGDSISELW
FCSKWLVVDGCFFWFLPLLRIPWLTFTPNFTLRTIAIFSVVDIFLSLKYEIPLTAIIGGL
WKFIYDREVSISEKSVKWYDIVNNNSHIQGKYTVHILPEGAVKLNPNANCFCLGEGVSAI
NLPIRINGTNPIHIQLARIDFETGGADVIDISAKEIKKMLKRAEKGEDPKLQVLSYSVKQ
PGLYRLTKVTDVTELDVRIYRSEALVVSCPKAALKVSPTYKRNKCKGDMSDLALQVEGLA
PLQITYSREMKGKPTVFTVQSIHPENFESPLLAGFSSDGTLAEQGDAALSWAQRQNIPVP
LNESLGSSGDWVYSVDKVSDACGNAVDYNAAYEDGDYVVPKRGSLSQNLKVHDRPLARFL
GCDPQHPMDLPKGATGVLPIQLLSGQDDAPYEVELTFTPYEKLGLASEHALGAAAGVHKL
KTLSHVVSIKEPGLYSVKAISSDFCSGDVMEPASCLVITPPEPSMAMRSDEILDKCTGSS
IGLTIDLTLVGAPPFELSYRLIKDNGNPAVKTLTIERTRHQVQFTPADAGHYAYEFFSLR
DKNYANVKIDPKTNYVEQTVKPMAGATFVDPSPRKKVCIDQPVEFDVKMQGMPPLTLNYE
LIHNGKRTKMTEPNITTGIHTIRTPPLANGGEYALALTTVEDESGCQIFVGSEAKIDVRW
QRPKAQFSSIEGKMSVRALERKTVDIPLRLTGESPWDVSIRNLDSNEPAKQLKFAGSNAY
LTVRDPGRYKLESVHDNGCPGTITESDSTFLITWIARPMLKLAESSSTTKGDVFTRKDVC
EGDEDAIELAFVGSPPFTIDYERTFRPEGYDSRRALDPIPQKLTAGLGVATVRLETSQAG
VNRYKFSRIADSLYDSPRESLVQNPIILEQTIHSRPSTSFANPSKVYKYCLDAGAGDDII
PIQLHGKAPFSLTINIKHFNTGKSDVINIPHIDSNIFNFRIPSHALTLGSHAVSVLKVKD
SRGCVRKTMEGPHVMVAVADMPTISPSSQQTNYCVGDRISFTLSGVPPFAVEYEWNGVLM
KAHNQPSEFARVAEKPGNFTITGLQDSASDCKVNVGLTQIVREVPSVRISDGYTVVRGIP
EGDQAEIHFDFYGTPPFTFTYTRSEIAKKGSKPRILEMHSQTTDGYKYSMFASQEGTYEV
VSIEDSYCSYAAGKANSGRKR
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacggaactcctaggatacctgcggcctttccaaggtctcctgcaactggtcga
gcacgtcgagtgcctcattcaccctcacctccagctcgggaatctccacctcgttcagtg
ggtgcgattgtttctacttccatgacttcaactatcgcaacaggtccaaagaacaacgcc
ccgcccagcatggtacaaactagagacgttgctcttccaccgttaatatcgctcgataca
ctagatgcgccgacacaacgtttatacgcggttggcttctttgtccttctgcaagcgtgg
aagttttacgacatcgcgcgattgtatactacggatggggactcgatatctgagttgtgg
ttctgctctaaatggctggttgtggatggctgtttcttttggttcctaccattacttcgg
ataccctggctcacatttacgccgaatttcaccctgcgtactatagctattttctcggtg
gtggacatctttttgagtctgaaatatgagatccctcttacagcgattattggaggcctt
tggaagtttatttatgatcgggaggtttccatttctgagaaaagtgtcaagtggtacgat
atcgtaaataacaactcccacatccagggaaagtatacggttcatattttacctgaaggt
gccgtcaaactgaatccgaatgcaaactgtttctgcttgggggagggtgtctctgcaatc
aatctccctattcgcatcaatgggacgaatcccattcacatacagcttgccagaattgat
tttgagacggggggcgcggatgtgatcgatattagtgccaaagagattaaaaagatgctt
aaacgggctgagaaaggcgaggatccaaagttacaggttctctcgtattcagtcaaacag
cctggcctttatcgtctcaccaaagtcacagatgtgacagaattggacgtccgcatttat
cgatctgaggctcttgtcgtatcttgtccgaaggcagcactcaaagtttcccctacgtac
aaaaggaataagtgcaagggggatatgtcggatcttgcactgcaagtagagggccttgcg
cctcttcaaattacatatagccgtgagatgaaagggaagcctactgtgtttacagtccaa
agtattcatcccgaaaacttcgaatcgcctctgcttgctggattcagcagcgatgggaca
ttggcagagcaaggcgatgctgccctgtcctgggcgcaacgtcagaatattcctgtacct
cttaacgaatcacttggttcctctggcgactgggtttattcagtggataaggtttctgat
gcctgtggcaatgctgtcgattacaatgctgcttatgaggatggtgattatgtcgttcct
aagagagggagcctttcgcaaaacctcaaagttcatgataggccgcttgctcgctttctt
ggctgtgatcctcagcatccgatggatctgccgaagggagccacgggggttcttcccata
cagctcttgtctggtcaagatgatgcgccatacgaggttgagcttactttcacgccgtac
gaaaagcttgggttggcctctgagcacgctttgggtgcggcggcgggggtacataaactc
aagactcttagccatgttgtctccatcaaggaacccggtctttatagtgtgaaggcgatt
tctagtgacttttgttccggcgatgtgatggagccagcttcatgtcttgtcattactcct
cctgaaccaagcatggctatgagatccgacgagatcctcgataaatgcaccggatcatcg
attggtcttacgatcgatcttacacttgttggagctccgcccttcgaactttcctaccgc
ctgataaaagacaatgggaacccggcagtcaagactttgacgattgaacgcaccagacat
caagtgcaattcacccctgcggatgctggtcactacgcatatgagtttttcagtctacgg
gacaaaaattacgctaatgtcaagattgatccaaaaaccaattatgtggagcaaactgtc
aaacctatggctggggcaacctttgtcgatccttctcctagaaagaaggtctgtattgat
cagcctgtcgaatttgacgtcaagatgcaggggatgcctccattaacattgaactacgaa
ctcattcataacggcaaaagaaccaagatgacggaacctaacatcacgaccggtatccat
acaatcaggaccccaccattggcaaacggtggggaatatgcgctggctctaaccacggtt
gaggatgagagcggttgccagatttttgttgggtccgaggccaagatcgatgtcagatgg
caaaggccaaaggcacaattttcctcgattgaaggtaaaatgtccgtaagggctctagaa
aggaagactgtagacattccattacgcttaactggcgaaagtccttgggatgtatccatt
cggaacctagacagtaatgagcctgccaaacagctcaaattcgctggttccaacgcctac
ctgaccgtcagggatccgggtcggtacaaacttgagagcgtacatgacaatgggtgccct
ggaacaataaccgaatcagacagcacgtttctgatcacctggatagcaaggccgatgttg
aagttagcagaatcttcgtccacaaccaagggtgatgtgttcactagaaaagatgtttgc
gaaggagatgaagatgctatcgagcttgccttcgttgggagcccacccttcacaatcgac
tatgagcggacattcaggcctgagggctatgattctagaagagcgcttgacccaattccc
caaaaacttactgctggcctcggtgttgctactgtgcgcctagagacatcccaggcgggt
gtcaaccggtataagttttctcggattgcagatagtctttacgatagcccacgggaaagc
cttgtccagaatccaattatccttgagcagactatccactcgaggccgtccacgagtttc
gcaaatcccagcaaagtctataagtattgtctggatgcgggcgcgggagatgatataatt
cccatccagcttcatgggaaagcgccgttctcattgaccatcaatattaaacacttcaat
accggcaagagcgatgtcatcaatatcccgcacattgattccaatatctttaactttaga
atcccaagccatgctttaacactcggaagccatgcagttagtgtcctcaaagtgaaggat
tctcgtggatgtgtacgaaagactatggagggtccccatgttatggtggctgttgctgat
atgccaactatctcaccttccagccaacaaacgaattactgcgtcggagatcgtatatct
tttacactttcgggggtcccgccttttgctgttgagtacgaatggaacggtgttttgatg
aaggcacacaatcagccttccgaatttgcccgtgtagcggagaagcctggtaatttcacg
attacgggacttcaggattctgcgagtgattgcaaggtgaatgttgggctcactcagatt
gtccgtgaggtcccttctgttcgaattagcgacggttatacagtggtcaggggtattccc
gagggtgaccaagctgagattcacttcgacttttatggcaccccaccatttacattcaca
tatactcgtagtgagattgccaagaagggctcgaagcccagaatccttgaaatgcattca
caaactacagacggctataaatacagtatgtttgcatcccaggaaggcacctacgaagtt
gtgtccattgaggacagttactgctcctacgctgcgggcaaggcgaactcgggacggaaa
aggtag
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