KEGG   Tuber melanosporum: GSTUM_00000398001
Entry
GSTUM_00000398001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K10259  F-box and WD-40 domain protein MET30
Organism
tml  Tuber melanosporum
Pathway
tml04111  Cell cycle - yeast
tml04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    GSTUM_00000398001
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    GSTUM_00000398001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tml04121]
    GSTUM_00000398001
Ubiquitin system [BR:tml04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     GSTUM_00000398001
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_Gbeta WD40_CDC20-Fz Beta-prop_TEP1_C Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 DSE1_N Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st F-box-like Beta-prop_EML Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_RIG_2nd F-box Beta-prop_WDR90_POC16_2nd CFAP251_N NBCH_WD40 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_NOL10_N TRM82_WD F-box_4 PRANC
Other DBs
NCBI-GeneID: 9181515
NCBI-ProteinID: XP_002837613
INRA: GSTUM_00000398001
UniProt: D5GBB1
LinkDB
AA seq 717 aa
MTVLTPSSTAPPKLPLPRLPSAPTRTPTSLPAVPPPPLKNTCEDARAARPSKKRKISSIF
NSNTCTEEMDESEPELFVPAIPADATENVKKGVGPFLSKHIPEQYAPQGPRGQQDTQQDE
SEKGNTRYCYRHRPDIKCRRRADEPTMEQLQKQMETLPAADQQAISHVWSLFSAAPAIHR
NMMLQGILTQCCFPQLSFISAALSTLIRIDFLTALPPEIAFKILCYLDTASLCKAAQVSH
RWRMLADDDVVWHKMCEQHIDRKCDKCGWGLPLLERKRLRATKRQMELRAKEPDLIFTAI
VPPPSKTRPWKDVYSERYKVESNWRRGRCTKKIFQGHSDGIMCLQFDDNTLATGSYDRTI
KIWDIESGQEIRTLVGHDLGVRALMFDDQKLISGSLDKSLKIWNWRTGECISTLRGHAAG
VICVHFNENLLASGSVDKTIKIWNFADKSRFALKGHTDWVNSVRLDSGSRTVFSASDDQT
VRMWDLDTKACIRVFEGHVGHVQQVIPLQLLNHQSPRGGAAATDGEDSSSSTFSPPTNPQ
IPPSRHHPNHPLEEYREANASDSPNRPRARAPPPKQMITAALDSQVKFWDVATGKCTKTL
FGHVEGVWALAADSLRVISGAQDRMVKVWDVRTGRCQRTITGHSGPVTCVGLSDSKMVTG
GEDGEARLYCFKSEGSSANGWTTPPEMVGSSDSGSAIAYSDGQAGDYYDGNGDGDSG
NT seq 2154 nt   +upstreamnt  +downstreamnt
atgacggtgctcaccccatcctcgaccgcacctccaaaactaccactgccacggctcccc
tcagctcccacacgcacccccacatcgttgcccgctgttccacccccgcccctgaaaaac
acttgcgaagacgccagggctgcaagaccctctaaaaaacgaaaaatttcctccattttc
aactccaatacttgcaccgaggagatggacgagagcgagccagaactttttgtccccgct
atcccagcggatgcaaccgagaacgtcaaaaagggcgtcggacctttcttgtcgaagcac
atcccggaacaatacgcgccccagggaccgcgtggtcagcaagacacacagcaagatgaa
tccgagaagggcaacacaaggtattgttatcggcataggcccgatatcaaatgtaggcgg
cgggcggacgagcctactatggagcaattgcaaaagcaaatggaaacgctacccgctgcg
gaccagcaagcgatttcgcacgtttggtcgctattctctgctgcgccagcaatccataga
aacatgatgctacaaggaatcctgacacaatgctgctttcctcaactttcctttatatcc
gctgctctcagtaccttgattcgcattgacttcttgaccgcacttcctcccgagattgcg
ttcaaaattctatgctatttggatactgcgtccttatgtaaggccgcacaagtcagccat
cgatggagaatgttagcagacgatgacgtcgtatggcataagatgtgcgaacagcatatc
gataggaagtgtgacaagtgcggatggggactccctctactggagaggaagagattaagg
gcaacgaaaaggcagatggaattgagggcgaaggaacctgatttgatttttacggctatt
gtgccccccccgtcaaaaacccgtccttggaaggatgtctactcagaacgatataaggtg
gaatcgaactggcgtcggggaaggtgcacgaagaagatcttccaaggccattcggacgga
ataatgtgtctacaattcgacgacaacacgctcgcgactggctcctacgatcgcactata
aagatctgggacatcgagagtgggcaggagatccgaaccctggtaggacacgacctagga
gtccgcgcgctgatgtttgacgaccaaaagcttatttcgggctccctcgataaatcccta
aagatatggaattggcgaacaggtgaatgcatatcaacattgcggggccacgcggccggc
gtgatatgtgttcactttaatgagaatctgcttgcgtccggttccgtcgacaagaccatc
aagatatggaactttgccgacaagagccgcttcgcgctgaagggacatacggactgggtc
aattcagtgcgattggactctggttcgagaacagttttctccgcgtcagacgaccagaca
gtgagaatgtgggatctcgatacaaaggcatgcataagggtattcgaggggcatgttggc
cacgtccagcaggtgatacctctacaacttctaaatcatcaatccccgagaggaggtgca
gcagcaacagacggagaagattcctcctcctccaccttctcccctccgacaaatccccag
atccccccatcacgccaccatcccaaccatccattggaggagtaccgagaagcaaacgcc
tcggattcgcccaatcggccccgcgctcgcgcgcctccaccaaagcagatgatcacagcc
gcgctcgactcccaagtcaagttctgggacgttgccacaggtaaatgcaccaaaacgctg
ttcggccacgtcgagggcgtgtgggccctagctgcagactccctccgagtaatatcgggt
gcgcaggatcgaatggtgaaggtttgggacgttcgcacaggccgctgtcagcgcaccatc
accggccactctggccccgttacatgcgtcggtctgagcgactccaagatggttaccgga
ggggaggatggcgaagcaagactatactgcttcaagagcgagggtagcagcgccaatggc
tggaccaccccgcctgagatggtaggcagcagcgattccggcagcgccattgcgtactcc
gacggccaggccggggattattatgatggtaacggtgatggagattccgggtaa

DBGET integrated database retrieval system