Tuber melanosporum: GSTUM_00000398001
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Entry
GSTUM_00000398001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K10259
F-box and WD-40 domain protein MET30
Organism
tml
Tuber melanosporum
Pathway
tml04111
Cell cycle - yeast
tml04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSTUM_00000398001
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
GSTUM_00000398001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tml04121
]
GSTUM_00000398001
Ubiquitin system [BR:
tml04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
GSTUM_00000398001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_CAF1B_HIR1
DSE1_N
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
F-box-like
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_RIG_2nd
F-box
Beta-prop_WDR90_POC16_2nd
CFAP251_N
NBCH_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_NOL10_N
TRM82_WD
F-box_4
PRANC
Motif
Other DBs
NCBI-GeneID:
9181515
NCBI-ProteinID:
XP_002837613
INRA:
GSTUM_00000398001
UniProt:
D5GBB1
LinkDB
All DBs
AA seq
717 aa
AA seq
DB search
MTVLTPSSTAPPKLPLPRLPSAPTRTPTSLPAVPPPPLKNTCEDARAARPSKKRKISSIF
NSNTCTEEMDESEPELFVPAIPADATENVKKGVGPFLSKHIPEQYAPQGPRGQQDTQQDE
SEKGNTRYCYRHRPDIKCRRRADEPTMEQLQKQMETLPAADQQAISHVWSLFSAAPAIHR
NMMLQGILTQCCFPQLSFISAALSTLIRIDFLTALPPEIAFKILCYLDTASLCKAAQVSH
RWRMLADDDVVWHKMCEQHIDRKCDKCGWGLPLLERKRLRATKRQMELRAKEPDLIFTAI
VPPPSKTRPWKDVYSERYKVESNWRRGRCTKKIFQGHSDGIMCLQFDDNTLATGSYDRTI
KIWDIESGQEIRTLVGHDLGVRALMFDDQKLISGSLDKSLKIWNWRTGECISTLRGHAAG
VICVHFNENLLASGSVDKTIKIWNFADKSRFALKGHTDWVNSVRLDSGSRTVFSASDDQT
VRMWDLDTKACIRVFEGHVGHVQQVIPLQLLNHQSPRGGAAATDGEDSSSSTFSPPTNPQ
IPPSRHHPNHPLEEYREANASDSPNRPRARAPPPKQMITAALDSQVKFWDVATGKCTKTL
FGHVEGVWALAADSLRVISGAQDRMVKVWDVRTGRCQRTITGHSGPVTCVGLSDSKMVTG
GEDGEARLYCFKSEGSSANGWTTPPEMVGSSDSGSAIAYSDGQAGDYYDGNGDGDSG
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgctcaccccatcctcgaccgcacctccaaaactaccactgccacggctcccc
tcagctcccacacgcacccccacatcgttgcccgctgttccacccccgcccctgaaaaac
acttgcgaagacgccagggctgcaagaccctctaaaaaacgaaaaatttcctccattttc
aactccaatacttgcaccgaggagatggacgagagcgagccagaactttttgtccccgct
atcccagcggatgcaaccgagaacgtcaaaaagggcgtcggacctttcttgtcgaagcac
atcccggaacaatacgcgccccagggaccgcgtggtcagcaagacacacagcaagatgaa
tccgagaagggcaacacaaggtattgttatcggcataggcccgatatcaaatgtaggcgg
cgggcggacgagcctactatggagcaattgcaaaagcaaatggaaacgctacccgctgcg
gaccagcaagcgatttcgcacgtttggtcgctattctctgctgcgccagcaatccataga
aacatgatgctacaaggaatcctgacacaatgctgctttcctcaactttcctttatatcc
gctgctctcagtaccttgattcgcattgacttcttgaccgcacttcctcccgagattgcg
ttcaaaattctatgctatttggatactgcgtccttatgtaaggccgcacaagtcagccat
cgatggagaatgttagcagacgatgacgtcgtatggcataagatgtgcgaacagcatatc
gataggaagtgtgacaagtgcggatggggactccctctactggagaggaagagattaagg
gcaacgaaaaggcagatggaattgagggcgaaggaacctgatttgatttttacggctatt
gtgccccccccgtcaaaaacccgtccttggaaggatgtctactcagaacgatataaggtg
gaatcgaactggcgtcggggaaggtgcacgaagaagatcttccaaggccattcggacgga
ataatgtgtctacaattcgacgacaacacgctcgcgactggctcctacgatcgcactata
aagatctgggacatcgagagtgggcaggagatccgaaccctggtaggacacgacctagga
gtccgcgcgctgatgtttgacgaccaaaagcttatttcgggctccctcgataaatcccta
aagatatggaattggcgaacaggtgaatgcatatcaacattgcggggccacgcggccggc
gtgatatgtgttcactttaatgagaatctgcttgcgtccggttccgtcgacaagaccatc
aagatatggaactttgccgacaagagccgcttcgcgctgaagggacatacggactgggtc
aattcagtgcgattggactctggttcgagaacagttttctccgcgtcagacgaccagaca
gtgagaatgtgggatctcgatacaaaggcatgcataagggtattcgaggggcatgttggc
cacgtccagcaggtgatacctctacaacttctaaatcatcaatccccgagaggaggtgca
gcagcaacagacggagaagattcctcctcctccaccttctcccctccgacaaatccccag
atccccccatcacgccaccatcccaaccatccattggaggagtaccgagaagcaaacgcc
tcggattcgcccaatcggccccgcgctcgcgcgcctccaccaaagcagatgatcacagcc
gcgctcgactcccaagtcaagttctgggacgttgccacaggtaaatgcaccaaaacgctg
ttcggccacgtcgagggcgtgtgggccctagctgcagactccctccgagtaatatcgggt
gcgcaggatcgaatggtgaaggtttgggacgttcgcacaggccgctgtcagcgcaccatc
accggccactctggccccgttacatgcgtcggtctgagcgactccaagatggttaccgga
ggggaggatggcgaagcaagactatactgcttcaagagcgagggtagcagcgccaatggc
tggaccaccccgcctgagatggtaggcagcagcgattccggcagcgccattgcgtactcc
gacggccaggccggggattattatgatggtaacggtgatggagattccgggtaa
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integrated database retrieval system