Tuber melanosporum: GSTUM_00000578001
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Entry
GSTUM_00000578001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
tml
Tuber melanosporum
Pathway
tml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSTUM_00000578001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00000578001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
GSTUM_00000578001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
9184818
NCBI-ProteinID:
XP_002837942
INRA:
GSTUM_00000578001
UniProt:
D5GC90
LinkDB
All DBs
AA seq
348 aa
AA seq
DB search
MLQSQQQQIFQNHQHFQPHDQNNWHHAAQQQQAQQQQPQQQQPQFGMPGRPMLTPSQPSP
APNPQLTLMGARAGTEEDPKVYGWILELMQGINRETALLELSKKREQVDDLALILWHSVG
VMTALLQEIISVYPLLMPSSLTAAASNRVCNALALLQCVASHNDTRGLFLNAHIPLFLYP
FLNTTSKSRPFEYLRLTSLGVIGALVKNDSSDVINFLLSTEIIPLCLRIMETGSELSKTV
AIFIVQKILLDDMGLAYICQTYERFYAVGTVLSNMVTQLVDQQTVRLLKHVVRCFLRLSD
NPRAREALRQCLPEPLRDATFSSVLRDDAATKRCLAQLLINLSDCVVE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaatcgcagcagcagcagatctttcagaaccatcagcattttcagccacatgat
cagaacaattggcatcatgcggcccaacaacagcaggcccagcagcagcaaccccaacaa
caacaaccccagtttggcatgcccggtagacctatgttgacaccttcgcagccttctcct
gctcctaatccacagttgactttgatgggtgctcgagctgggaccgaagaggatcccaag
gtttacgggtggatacttgagttgatgcagggcattaatagagaaactgctttgttagag
ttgagcaagaagagggagcaggtggacgatcttgcgctgattctttggcactcagttggt
gtcatgaccgccttgttacaagagatcatctccgtgtatccgctactcatgccatccagc
cttaccgccgctgcctcaaatcgcgtgtgcaatgccttggcattacttcagtgcgttgcg
tcgcataacgatactagaggactctttttgaatgctcatatcccgctttttttataccca
ttccttaacacgacgtccaagtccaggccattcgagtatttgcgccttacctcgctaggt
gtcattggagctctagtcaagaatgattcctctgatgtcatcaactttctcctgtccacc
gaaattattcctttgtgccttcgcatcatggagactggatctgagctctccaagactgtt
gcaatttttattgtccaaaagatcctcctcgatgatatggggctggcgtacatctgtcaa
acttatgagcggttctatgctgtcggaactgtcttgagcaacatggtcacccagctcgtg
gaccagcagacggttaggctactcaagcacgtggttaggtgctttcttcgcttgagcgat
aaccctcgtgctcgtgaagctttgagacagtgccttccagagcccttgcgtgacgcaacg
ttttcctcggtccttcgtgatgacgcagcgacaaagaggtgccttgcacaactcctaatt
aatctctcagattgcgttgttgaataa
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integrated database retrieval system