KEGG   Tuber melanosporum: GSTUM_00000578001
Entry
GSTUM_00000578001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
tml  Tuber melanosporum
Pathway
tml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GSTUM_00000578001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00000578001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     GSTUM_00000578001
SSDB
Motif
Pfam: Rcd1
Other DBs
NCBI-GeneID: 9184818
NCBI-ProteinID: XP_002837942
INRA: GSTUM_00000578001
UniProt: D5GC90
LinkDB
AA seq 348 aa
MLQSQQQQIFQNHQHFQPHDQNNWHHAAQQQQAQQQQPQQQQPQFGMPGRPMLTPSQPSP
APNPQLTLMGARAGTEEDPKVYGWILELMQGINRETALLELSKKREQVDDLALILWHSVG
VMTALLQEIISVYPLLMPSSLTAAASNRVCNALALLQCVASHNDTRGLFLNAHIPLFLYP
FLNTTSKSRPFEYLRLTSLGVIGALVKNDSSDVINFLLSTEIIPLCLRIMETGSELSKTV
AIFIVQKILLDDMGLAYICQTYERFYAVGTVLSNMVTQLVDQQTVRLLKHVVRCFLRLSD
NPRAREALRQCLPEPLRDATFSSVLRDDAATKRCLAQLLINLSDCVVE
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgctgcaatcgcagcagcagcagatctttcagaaccatcagcattttcagccacatgat
cagaacaattggcatcatgcggcccaacaacagcaggcccagcagcagcaaccccaacaa
caacaaccccagtttggcatgcccggtagacctatgttgacaccttcgcagccttctcct
gctcctaatccacagttgactttgatgggtgctcgagctgggaccgaagaggatcccaag
gtttacgggtggatacttgagttgatgcagggcattaatagagaaactgctttgttagag
ttgagcaagaagagggagcaggtggacgatcttgcgctgattctttggcactcagttggt
gtcatgaccgccttgttacaagagatcatctccgtgtatccgctactcatgccatccagc
cttaccgccgctgcctcaaatcgcgtgtgcaatgccttggcattacttcagtgcgttgcg
tcgcataacgatactagaggactctttttgaatgctcatatcccgctttttttataccca
ttccttaacacgacgtccaagtccaggccattcgagtatttgcgccttacctcgctaggt
gtcattggagctctagtcaagaatgattcctctgatgtcatcaactttctcctgtccacc
gaaattattcctttgtgccttcgcatcatggagactggatctgagctctccaagactgtt
gcaatttttattgtccaaaagatcctcctcgatgatatggggctggcgtacatctgtcaa
acttatgagcggttctatgctgtcggaactgtcttgagcaacatggtcacccagctcgtg
gaccagcagacggttaggctactcaagcacgtggttaggtgctttcttcgcttgagcgat
aaccctcgtgctcgtgaagctttgagacagtgccttccagagcccttgcgtgacgcaacg
ttttcctcggtccttcgtgatgacgcagcgacaaagaggtgccttgcacaactcctaatt
aatctctcagattgcgttgttgaataa

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