Tuber melanosporum: GSTUM_00000636001
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Entry
GSTUM_00000636001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12817
pre-mRNA-splicing factor 18
Organism
tml
Tuber melanosporum
Pathway
tml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTUM_00000636001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tml03041
]
GSTUM_00000636001
Spliceosome [BR:
tml03041
]
Complex C
Other components
Step II factors
GSTUM_00000636001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prp18
PRP4
DDRGK
DUF4670
DUF5427
Motif
Other DBs
NCBI-GeneID:
9184805
NCBI-ProteinID:
XP_002837936
INRA:
GSTUM_00000636001
UniProt:
D5GC84
LinkDB
All DBs
AA seq
346 aa
AA seq
DB search
MDFASIMAAEISKKRKPEPTSKSPAEPAPKKYMKRSEIEAQRRREYEEEQKRLEKERREK
AERKRQEEEEERSRREATKAKQRQLAEEKRRRKEEETQQLGKEGPLAKEGLDSSDEANSS
EAMTEAEAIEKLRSMGEPACLFAETHPQKVRRLKRLLAALEIKNREATPPLSEEEMVLSP
GDILDDKDKVYRQLAAWFALVLSEWEITLESRSSALKDSFQGKAAANSMIQAKTYMVPLF
RHFKQRDLHEDIYTKVCEIVVEAQARRYVRANDVYLRLSIGNAAWPIGVTMVGIHERSAR
EKLHEKGLAAHIMSDEVTRKFLQSIKRCLSFCQTRWPPEDPLQLMG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgcctcaatcatggccgccgagatttcaaagaagcggaagccagagcccact
tcgaaatcgcccgcagaacccgcccctaaaaaatacatgaagcgctccgaaattgaagcg
cagcgccgccgggaatacgaggaagagcaaaagcgcctcgagaaagaacgacgcgagaaa
gccgagaggaaacgacaggaggaagaagaagagcgcagtcgccgcgaggcaactaaggct
aaacaaaggcagcttgcggaagaaaaacgccgtcggaaggaagaggaaactcaacagtta
gggaaggagggtccgctcgcaaaggagggtttggacagttcagatgaagcaaacagttcg
gaggctatgacggaagctgaggcgatagagaagttacgaagcatgggggaacctgcctgt
ttgtttgccgaaacacatccgcaaaaggtccgccgcttgaagaggcttttagcagcgctg
gaaataaagaatagggaggcgacacctccgctgtcggaggaggaaatggtactcagtcca
ggcgatattctagacgacaaagataaggtgtaccggcaactcgcagcatggtttgcattg
gttctctcggaatgggagattacacttgagagcaggtcgtccgcgctcaaagactcattc
caaggcaaagcggcagcaaactcgatgatccaggcaaagacgtatatggtcccactattc
cgccacttcaaacaaagggatctgcacgaagatatatacacgaaagtctgcgaaattgtg
gtagaagctcaggcgagaagatacgttcgggcaaacgacgtctacctaagattgagtatc
ggaaacgctgcttggcccattggcgttaccatggttggtatccacgaacgttccgcacgc
gagaagcttcatgagaaaggattagcagcacacatcatgagcgacgaggttacgagaaaa
tttcttcagagcatcaagagatgcctgagcttttgtcagactagatggcctccggaggac
ccattacagcttatgggatag
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