Tuber melanosporum: GSTUM_00000796001
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Entry
GSTUM_00000796001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tml
Tuber melanosporum
Pathway
tml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GSTUM_00000796001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00000796001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
GSTUM_00000796001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Agd3_CE
Motif
Other DBs
NCBI-GeneID:
9183815
NCBI-ProteinID:
XP_002838161
INRA:
GSTUM_00000796001
UniProt:
D5GCV9
LinkDB
All DBs
AA seq
309 aa
AA seq
DB search
MDQDEDAYLYGDDPAATEETSISSATLQQAPNSPPTALPENLPEHSEGDTPMADSAPERA
AKEGDLEEEVDDSEDEIEFVIERKDGTRPEPPPQPSRYNQVRMAPTRPIPESSSSAKATT
PQPSTSTTPHPPTGPASSQHPHPPTSSSSKLDLNGNPAYHGTPIKSISLDSDTLLPSDKP
WRKPGADVTDYFNYGFDEFTWTAYCQKQESMREEFDPRKMMEQMMLLSGMTGGLGMPGIV
VDPSAVNVGVGGMDMNTAAAMMAFNPTGGGGSSATGGAPTTAVGTSAGGTDMSMVSGMRR
RCRGVRNGG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaccaagatgaagacgcatacctctacggagatgatccagcagcaacggaggagact
tccattagcagtgcgactctccagcaagctccaaattcccctcccaccgcactacctgaa
aacctccctgagcactctgaaggagatacaccaatggcagatagcgctcccgagcgtgct
gctaaggaaggcgacctagaagaagaagtcgacgacagcgaagatgaaattgaattcgta
attgagcgaaaagacggtactcgaccggagccgccccctcaaccatctcgctacaaccaa
gtccgcatggcccccacccgccccatcccagaatcctccagctccgcaaaagccacaacg
ccccaaccatcaaccagcacaacaccacatcccccaaccggtcccgcatcctcccaacac
cctcaccctccgacaagctcttcttcaaaactagacctgaatgggaacccagcttaccac
ggaacgccgataaagtccatttccttggactccgacacgctcctaccctccgacaaaccg
tggcgtaagcccggggctgacgtgacggattacttcaactacggcttcgacgagtttacc
tggacagcatattgtcagaagcaagagtccatgcgggaggaattcgatccgaggaagatg
atggagcagatgatgttactctcaggtatgactgggggattgggaatgccagggattgtt
gttgacccgtctgctgttaatgttggtgttggggggatggacatgaatactgcagcggct
atgatggctttcaatcccactggagggggaggcagcagcgccaccggcggggcaccgaca
acagcagtcggtacaagtgccggtgggacggatatgagtatggttagtgggatgcggcgc
cgctgccggggcgtacggaatggcggctga
DBGET
integrated database retrieval system
