KEGG   Tuber melanosporum: GSTUM_00000818001
Entry
GSTUM_00000818001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K15171  transcription elongation factor SPT4
Organism
tml  Tuber melanosporum
Pathway
tml03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    GSTUM_00000818001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tml03021]
    GSTUM_00000818001
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00000818001
Transcription machinery [BR:tml03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     GSTUM_00000818001
  RNA polymerase I system
     GSTUM_00000818001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     GSTUM_00000818001
SSDB
Motif
Pfam: Spt4 Acc5b_avian_CoV zf-RING_10
Other DBs
NCBI-GeneID: 9187947
NCBI-ProteinID: XP_002838138
INRA: GSTUM_00000818001
UniProt: D5GCT6
LinkDB
AA seq 122 aa
MSSGSNFVPTNQYRHLRACMVCSVVQTQQKFIKDGCPNCEDYLNFRGQPDFADDCTSPVF
EGLITLRDPKNSWVAKWQRLDGYRKGVYAVKVSGNLPIEALDMLASHNIEYRPRDGSDVN
QD
NT seq 369 nt   +upstreamnt  +downstreamnt
atgtccagtggatccaatttcgtcccaaccaaccagtaccggcatttacgggcgtgtatg
gtctgttcagtagttcaaactcagcaaaaatttattaaggatggctgcccgaactgcgaa
gactacctgaacttccgcggccaacctgactttgccgacgattgcacctcaccggttttc
gagggccttatcacactccgcgacccaaaaaactcttgggtggctaaatggcagagactt
gacggatatcgcaagggagtttatgcggtgaaagttagcgggaatcttccaatagaggcc
ctcgatatgcttgcttctcacaatatcgagtaccgaccccgcgatggaagtgacgttaac
caggattga

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