Tuber melanosporum: GSTUM_00000818001
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Entry
GSTUM_00000818001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K15171
transcription elongation factor SPT4
Organism
tml
Tuber melanosporum
Pathway
tml03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
GSTUM_00000818001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tml03021
]
GSTUM_00000818001
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00000818001
Transcription machinery [BR:
tml03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
GSTUM_00000818001
RNA polymerase I system
GSTUM_00000818001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
GSTUM_00000818001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Acc5b_avian_CoV
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
9187947
NCBI-ProteinID:
XP_002838138
INRA:
GSTUM_00000818001
UniProt:
D5GCT6
LinkDB
All DBs
AA seq
122 aa
AA seq
DB search
MSSGSNFVPTNQYRHLRACMVCSVVQTQQKFIKDGCPNCEDYLNFRGQPDFADDCTSPVF
EGLITLRDPKNSWVAKWQRLDGYRKGVYAVKVSGNLPIEALDMLASHNIEYRPRDGSDVN
QD
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtggatccaatttcgtcccaaccaaccagtaccggcatttacgggcgtgtatg
gtctgttcagtagttcaaactcagcaaaaatttattaaggatggctgcccgaactgcgaa
gactacctgaacttccgcggccaacctgactttgccgacgattgcacctcaccggttttc
gagggccttatcacactccgcgacccaaaaaactcttgggtggctaaatggcagagactt
gacggatatcgcaagggagtttatgcggtgaaagttagcgggaatcttccaatagaggcc
ctcgatatgcttgcttctcacaatatcgagtaccgaccccgcgatggaagtgacgttaac
caggattga
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