Tuber melanosporum: GSTUM_00000850001
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Entry
GSTUM_00000850001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14284
nuclear RNA export factor
Organism
tml
Tuber melanosporum
Pathway
tml03008
Ribosome biogenesis in eukaryotes
tml03013
Nucleocytoplasmic transport
tml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTUM_00000850001
03015 mRNA surveillance pathway
GSTUM_00000850001
03008 Ribosome biogenesis in eukaryotes
GSTUM_00000850001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00000850001
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00000850001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTUM_00000850001
mRNA cycle factors
Stress granule specific factors
GSTUM_00000850001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
GSTUM_00000850001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
TAP_C
RRM_9
LRR_NXF1-5
LRR_4
LRR_9
NTF2
LRR_8
DUF1937
Motif
Other DBs
NCBI-GeneID:
9183829
NCBI-ProteinID:
XP_002838175
INRA:
GSTUM_00000850001
UniProt:
D5GCX3
LinkDB
All DBs
AA seq
661 aa
AA seq
DB search
MNSTALRPQGSHGGITKRAGGRTRIDRDGDLDMDGPSGGRGGRGRGNRNRGGRGGGAGAV
SRGGRSGAGSIIPAGPAASRMDLNQNRNRGIPARGPRNGIVSVSETLVEVRITGWKDSKG
SAEEAIAFLERKSRVKLRKTLKQGDTIIAQVPFPKIHSILEWNDAQFASSKLRLAAPSLG
RLDVTERSEAVISRANPANKDTVDTILALEGVLANRYNPESKFLDLSRLGEDALLKANGF
FQLSSTTSKMFPALMQVAEKKFTTAQQKRDTVHSVSLAYNNLKDVRTVTSLSVTFPDLKN
LSLEGNSIQDWNTLDSWRHRFKNLEQLVLSGNPITSQQGYVEEAYRRYQKLLMLDNIPVD
PAIRQKITAEGAAPVLPHKVQSRFIQDDYGVGMKFLSRFFEAYDADRVSLLREFYDGESL
FSLSVNTSAPRTKEQQNTRQFWDEYIPRSRNLKRVSHLKGRTDRLAMGPDEIAKLWGELP
ATKHDLANGDAWSFDIWPVEVTSGVMGVLCTVHAEFQELNKVDGPQKVVRRSFDRSFMLR
PDVLGKVKVANDMLVVRAYGGFDSWKPEDGSGSAGGGGEQEKGEAAKKSMCEQLMAQTRL
RSDWATMCLSETGWNIESAWKAFLEAKANGAIPPDAYLPDSTTAPATAIGANTAGGRDGI
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaattctactgctcttcgcccccaggggtctcatggcggcatcaccaaacgcgctggt
ggtcgtactcgaattgacagagacggagatcttgatatggatggtccttctggaggacgc
ggtggccgtggccgaggaaatagaaacaggggcggtcgtggtggtggggccggtgctgtt
tctagaggagggcgatcgggcgctggttctattatccccgctggtcctgctgccagtcgt
atggatctgaatcagaacaggaatagggggatcccagcgagaggtcctcggaatggaata
gtatccgtttctgaaacactagttgaggttagaatcacagggtggaaggatagcaagggt
tctgcggaggaggcaatcgctttcctggagaggaagagtcgagtgaagcttcgaaagacc
ttaaaacaaggagacaccatcatcgcccaggtcccattcccaaagattcactcgattcta
gaatggaatgacgcccaatttgcatcttccaagctaaggctagccgcacccagtctcggc
agactcgacgttacagagaggagtgaggcggttatctcacgagccaatccagcgaataag
gataccgtggacacgatcctagcccttgagggcgttcttgcgaatcggtataatcccgag
agcaaattcctagatctatcacggctcggtgaggatgcactcctgaaggcaaacggcttc
ttccaactcagcagcacaaccagcaagatgttcccagcgctcatgcaagtagctgaaaag
aagttcacgacggcgcagcaaaaacgtgacacggtccacagcgtatcgctagcatacaat
aacctaaaggacgtccgcaccgtcacgagcctgagcgtaacgtttccggacttgaagaac
ttgagcctggaaggaaattccatccaggactggaacacactggacagttggcgccacagg
ttcaagaacttggaacagttggtcctcagcggaaacccgatcacatcacaacagggctac
gtagaggaggcctaccggcgatatcagaagcttttaatgctggacaatatccctgtggac
cccgcgatcagacaaaaaatcacggcggagggcgcagcacccgtcctcccgcacaaagtc
cagtcaagattcatccaggacgactacggcgtcggcatgaagttcctctcccgcttcttc
gaagcctacgacgcggaccgggtctccctgctccgcgagttctacgacggtgaatctctc
ttctccctctcggtcaacacgtccgcgccgcgcaccaaggagcagcaaaacacccgccag
ttctgggacgagtacatccccaggtcacgcaacctgaagcgcgtctcgcacttgaagggc
cgcaccgatagactcgccatggggcccgacgagatcgccaagttgtggggcgagctgcct
gccaccaagcacgaccttgccaacggtgatgcttggagcttcgacatctggcctgtcgag
gtcacgtccggcgtcatgggcgtgctatgcaccgtacatgccgagttccaggaactcaat
aaggtggacggcccgcagaaggttgtccgccggagcttcgaccgctccttcatgctgcgg
ccggacgttctcggtaaggttaaggtggccaatgacatgttggtggtcagggcctatggt
ggcttcgatagctggaagccggaggatgggagtgggagcgctggaggtggaggggagcag
gaaaaaggagaagcagcgaagaagtccatgtgtgagcaattgatggcgcagaccaggttg
aggtcggactgggctaccatgtgtctttcggagacagggtggaatattgaaagtgcctgg
aaggcgtttttggaggctaaggccaacggcgcaatccctccggatgcatatttgcccgat
tctaccaccgctcctgccactgccattggcgcgaatactgcgggtggccgagatgggatc
ttatag
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integrated database retrieval system
