Tuber melanosporum: GSTUM_00000918001
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Entry
GSTUM_00000918001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
tml
Tuber melanosporum
Pathway
tml03250
Viral life cycle - HIV-1
tml04144
Endocytosis
tml04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
GSTUM_00000918001
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
GSTUM_00000918001
04145 Phagocytosis
GSTUM_00000918001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tml04131
]
GSTUM_00000918001
Membrane trafficking [BR:
tml04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
GSTUM_00000918001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
FYVE
Vps27_GAT-like
UIM
FYVE_2
GAT
UIM_2
CID
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
9183886
NCBI-ProteinID:
XP_002838232
INRA:
GSTUM_00000918001
UniProt:
D5GD30
LinkDB
All DBs
AA seq
689 aa
AA seq
DB search
MAWFTASNSSLDDQVEKATSSSLEDMALNLEISDIIRSKTVQPKEAMRSLRKRIGHRNPN
VQLAALSLTDTCVKNGGSHFLAEIASREFMDNLVSLLKVPYSLDPKVESKILELIQTWAS
AFEGKSHLSYVGEIYRMLINEGFNFPPPTKVSSSFVDSSAPPDWTNSDVCMRCRTPFTFT
NRKHHCRNCGNVFCGSCSSKSIPLPHIGIIQAVRVCDGCNTKLTEKRVLGPSAKPQSRPP
QVQKQKPNNLMQPRNARVEDDDDEDLKMALKMSLEEVKGRGSAGYVSQQQLQAQRQTAPP
HAMPDEDEDEELKAAIAASLKDMEEQKAKSAWSSPSAAVKYTASASQASVTHRPDHELSP
AEAENINLFATLVDRLQSQPTGTILREPQIQELYDSIGALRPKLARTFGETMSKYEALCD
LHAKLGTVVRYYDRMLEERLSYTYGRHGIGGVSSPAPYQQLPPSNSAYPTLPSVEGYYGV
GGGNTPGAPQNPYPNSQTNYQNYYTQPHTFDKQGSSLHAQSPKSHKIPPQAAYQQYNGHN
GPLPSEPSAPDPSLHGSEPPVNAPPPQQQQQPQQQQPQSQLQPQQPLTGPSAQPQKPPSQ
QHHSPPQQNPDASYWQYPKNGQQPEYNYAYSPSSQPLRWQPGPGTGPGGTPFGHHNYGYP
NINEASTPAPVHSQPQQQPKVVEESLIDL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtttacagcatcgaactcgtctcttgacgaccaagtcgagaaagctacatct
tcgagcttagaggatatggcactcaacctagaaatctccgacatcatacggagtaagacg
gttcaaccaaaagaagctatgcgctctttgcggaagcgaataggacatcgtaatcctaat
gttcagctagcggctctaagtcttacagatacctgcgtcaaaaatggaggatcccacttt
ttagccgaaattgcctcacgggaatttatggacaatctggtttctctactaaaagttcct
tattcactagaccccaaagttgagagcaagatactagagctcatacaaacctgggcatct
gcgtttgaagggaagagccatctttcatatgtcggggagatatatcgaatgctcataaat
gagggttttaacttcccaccaccaacaaaggtttcctcatcatttgttgactcttcggcg
cctcctgactggactaattcagatgtttgtatgcggtgtcgaacaccttttactttcact
aacagaaagcatcattgccgcaattgcggaaatgttttctgcggttcttgctcctcgaag
tcgataccactccctcacataggaataatacaggccgttcgtgtgtgcgatggatgtaac
actaaattgaccgagaagcgggtcttgggcccttcagcgaaaccgcagtctcgtccgcct
caagtgcagaagcaaaaaccaaataatcttatgcagccgagaaacgctagggttgaggac
gacgacgatgaggacctcaaaatggcgttgaagatgtcgttggaagaagttaagggaagg
ggaagtgcgggttatgtttcccaacagcagttacaagctcagagacaaaccgctccacct
catgctatgcctgacgaggacgaggatgaggagttgaaggcggcgatcgctgcgagtttg
aaggatatggaggagcagaaagcaaagtctgcgtggtcgagcccgagtgccgcagtcaag
tacactgcttcggcttcacaagcaagtgtcacccatagacctgatcacgaactgagccct
gctgaggccgaaaacatcaatctttttgccacgcttgttgatcgactgcaatcccaaccg
actgggacaatcctcagagaaccccagattcaagagctttatgacagcattggtgctcta
aggccaaaattggcccgaacctttggtgagaccatgagtaaatatgaggctctatgtgat
ctacacgcaaaacttggtactgttgtacgctattatgaccggatgttggaggagaggttg
agctatacctatggtcggcatgggatcgggggagtttcttcccccgctccttaccaacaa
ctccccccttcgaatagtgcgtatcctactttgccttctgttgagggctattatggagtt
ggtgggggtaacacaccaggagctccacaaaatccctaccccaattcgcagacgaattat
cagaattattatacgcagcctcatacttttgataagcagggatcttctcttcacgctcag
tcgcccaaatctcataagattcctccgcaggcagcttaccagcaatacaacgggcacaat
ggccccctaccatcagaacctagtgctcctgacccttcactgcatggttccgaacctccg
gtaaatgctccacccccacaacagcaacaacagccccagcaacaacagccgcaatcgcaa
ctacagccccagcaaccgctgacgggaccatcagcccaacctcagaaacccccttcgcaa
cagcatcactctcctccgcagcaaaatccggatgcatcatactggcaatatccaaagaat
ggacaacagcctgaatataattacgcctattcgccatcttcacagcctctacgatggcag
cctgggcccggtaccggccctgggggaactccattcgggcaccataattatggatacccg
aatatcaatgaggcttcaaccccagcgcctgtgcatagtcagccacagcaacagcccaag
gtagtggaggagagcttgattgatttgtag
DBGET
integrated database retrieval system
