KEGG   Tuber melanosporum: GSTUM_00000944001
Entry
GSTUM_00000944001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
tml  Tuber melanosporum
Pathway
tml03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    GSTUM_00000944001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tml03009]
    GSTUM_00000944001
Ribosome biogenesis [BR:tml03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    GSTUM_00000944001
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I ANAPC4_WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Cytochrom_D1 WD40_MABP1-WDR62_2nd
Other DBs
NCBI-GeneID: 9183878
NCBI-ProteinID: XP_002838225
INRA: GSTUM_00000944001
UniProt: D5GD23
LinkDB
AA seq 472 aa
MRDDAQSFVFSEKAGGRRSRNPPQSGEKGTWANREFSSSNPVTCIATVIGEGGAGNAENA
ARDLAGIITGHRDSKSGSLWSFENKSLGGRWAQTTDGGLVRSAGVSSCGTFCFIGSSNGR
MAMYNIQSGIKRRQFPEPVSAATAKRLKNMRELWGAQGRISDFCFSKDGRWVLGASADRV
IRVWDLPTGHLIDGIRTKSDATAMAFSGTGEFLATAHVDSVGINLWTNRTLFRHVPTRHL
DEKDIVDMTAPFASGEGGVGVIEAALNPQGDGEDDCTGTYTTVDQLSSNMLTMSLIPRAR
WQTLLNLDVIEQRNKPKEAPGTPEKAPFFLPPLGHTAERSRILRMSRDSGESTFTKLLHE
AADGNNRDYTVILAHLKALSPSTADLEIRSLQVNELVPFVRATTQRLRSRRDYQLVESWV
NVFLKCHPEGVMSEEDVRDELRKWMVEQKREAGRLAQLVGYCSGVAGFLSGR
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgagagatgacgcacagtcatttgtcttctcagaaaaggccggaggtaggaggtcgagg
aaccctccgcaaagtggtgaaaagggcacttgggccaatagggaattttcgtcatcaaac
ccagtaacctgtatagcaactgtaataggtgaaggtggtgccggaaatgcagaaaatgcg
gcacgggacctggcaggaataataacaggtcatcgagactctaaatccggaagtctctgg
agctttgagaacaagtctttgggagggcgttgggctcaaacaactgatggtgggctcgtc
cggagcgcaggtgtgtcgtcttgcgggactttctgtttcataggttctagcaacggtagg
atggcaatgtataatatccagagcgggattaaaaggcgtcaattccctgagccagtatca
gccgccacggcgaagcgtcttaaaaatatgagagagctttggggtgcgcaaggtaggata
agcgacttttgtttttcgaaggacggaagatgggtattaggcgcttcggcggatagagtt
atcagagtttgggatttgccaactgggcatttgattgatggtattaggactaagagtgat
gctactgctatggcgttttctgggactggggaattcctggcgacggctcacgttgatagt
gttgggataaacttatggacgaatagaactttgttcagacacgttccgactagacatctt
gatgaaaaggacatagtggacatgactgctccgttcgcctctggagaaggcggtgtcggt
gtcatcgaagctgcacttaatccccagggcgatggagaggatgactgcaccggcacatac
accacagtagaccaactgagtagcaacatgttgacaatgtctcttattccaagggcaaga
tggcagacgctgcttaacctcgacgttattgagcaacgaaacaaaccgaaggaagctccc
gggactcctgaaaaagcacctttcttcctccccccactcggccatacagccgagcgatcc
cgcatcctccgcatgagccgggacagcggggaatctaccttcacaaaactcctccacgaa
gcagcagacggcaacaatcgagactacaccgtcatccttgcccatctgaaagcgctctca
ccctcgacagcagatctagaaatcaggagtttgcaagtaaacgagttggtgccgtttgtt
cgggccacgacgcagcgactgaggagccggagagactaccagctcgtagagagttgggtt
aacgtgtttctcaagtgtcatcccgagggcgtgatgagcgaggaggacgttagggatgaa
ttgaggaagtggatggtggaacagaaaagggaggctggcagattggcgcaattggtgggg
tattgctctggagttgcggggtttttgagtgggaggtga

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