Tuber melanosporum: GSTUM_00000944001
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Entry
GSTUM_00000944001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
tml
Tuber melanosporum
Pathway
tml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSTUM_00000944001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00000944001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
GSTUM_00000944001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Cytochrom_D1
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
9183878
NCBI-ProteinID:
XP_002838225
INRA:
GSTUM_00000944001
UniProt:
D5GD23
LinkDB
All DBs
AA seq
472 aa
AA seq
DB search
MRDDAQSFVFSEKAGGRRSRNPPQSGEKGTWANREFSSSNPVTCIATVIGEGGAGNAENA
ARDLAGIITGHRDSKSGSLWSFENKSLGGRWAQTTDGGLVRSAGVSSCGTFCFIGSSNGR
MAMYNIQSGIKRRQFPEPVSAATAKRLKNMRELWGAQGRISDFCFSKDGRWVLGASADRV
IRVWDLPTGHLIDGIRTKSDATAMAFSGTGEFLATAHVDSVGINLWTNRTLFRHVPTRHL
DEKDIVDMTAPFASGEGGVGVIEAALNPQGDGEDDCTGTYTTVDQLSSNMLTMSLIPRAR
WQTLLNLDVIEQRNKPKEAPGTPEKAPFFLPPLGHTAERSRILRMSRDSGESTFTKLLHE
AADGNNRDYTVILAHLKALSPSTADLEIRSLQVNELVPFVRATTQRLRSRRDYQLVESWV
NVFLKCHPEGVMSEEDVRDELRKWMVEQKREAGRLAQLVGYCSGVAGFLSGR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagagatgacgcacagtcatttgtcttctcagaaaaggccggaggtaggaggtcgagg
aaccctccgcaaagtggtgaaaagggcacttgggccaatagggaattttcgtcatcaaac
ccagtaacctgtatagcaactgtaataggtgaaggtggtgccggaaatgcagaaaatgcg
gcacgggacctggcaggaataataacaggtcatcgagactctaaatccggaagtctctgg
agctttgagaacaagtctttgggagggcgttgggctcaaacaactgatggtgggctcgtc
cggagcgcaggtgtgtcgtcttgcgggactttctgtttcataggttctagcaacggtagg
atggcaatgtataatatccagagcgggattaaaaggcgtcaattccctgagccagtatca
gccgccacggcgaagcgtcttaaaaatatgagagagctttggggtgcgcaaggtaggata
agcgacttttgtttttcgaaggacggaagatgggtattaggcgcttcggcggatagagtt
atcagagtttgggatttgccaactgggcatttgattgatggtattaggactaagagtgat
gctactgctatggcgttttctgggactggggaattcctggcgacggctcacgttgatagt
gttgggataaacttatggacgaatagaactttgttcagacacgttccgactagacatctt
gatgaaaaggacatagtggacatgactgctccgttcgcctctggagaaggcggtgtcggt
gtcatcgaagctgcacttaatccccagggcgatggagaggatgactgcaccggcacatac
accacagtagaccaactgagtagcaacatgttgacaatgtctcttattccaagggcaaga
tggcagacgctgcttaacctcgacgttattgagcaacgaaacaaaccgaaggaagctccc
gggactcctgaaaaagcacctttcttcctccccccactcggccatacagccgagcgatcc
cgcatcctccgcatgagccgggacagcggggaatctaccttcacaaaactcctccacgaa
gcagcagacggcaacaatcgagactacaccgtcatccttgcccatctgaaagcgctctca
ccctcgacagcagatctagaaatcaggagtttgcaagtaaacgagttggtgccgtttgtt
cgggccacgacgcagcgactgaggagccggagagactaccagctcgtagagagttgggtt
aacgtgtttctcaagtgtcatcccgagggcgtgatgagcgaggaggacgttagggatgaa
ttgaggaagtggatggtggaacagaaaagggaggctggcagattggcgcaattggtgggg
tattgctctggagttgcggggtttttgagtgggaggtga
DBGET
integrated database retrieval system