Tuber melanosporum: GSTUM_00001151001
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Entry
GSTUM_00001151001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tml
Tuber melanosporum
Pathway
tml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSTUM_00001151001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00001151001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GSTUM_00001151001
mRNA degradation factors
5'-3' decay
Lsm complex
GSTUM_00001151001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
9183081
NCBI-ProteinID:
XP_002838548
INRA:
GSTUM_00001151001
UniProt:
D5GDZ6
LinkDB
All DBs
AA seq
125 aa
AA seq
DB search
MEGDPPSLPPQMFTTSAQLLDLTDKKLLVALRDGRKLIGVLRSWDQQTLSCRVPSSAYTS
GMRTNVLLLGEIDLDREDDIPFRRASVEEVFAAQRAIDTEKKRTDKVHRKKLRALGFEDE
GEVLV
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgacccaccttctctgcccccgcagatgttcacgacttccgctcagttactc
gatctcaccgataaaaaactcctggtcgcactccgtgatgggagaaagttgattggtgtt
ttaaggtcctgggatcagcaaaccttgtcttgcagagtaccatcgagcgcttatacgtcg
gggatgcgtactaatgtgctgttacttggggagattgacctagatagagaagacgacata
cccttccgtcgcgcctctgttgaggaggtattcgctgcacagagggctatagacactgaa
aagaagagaacggataaagttcataggaagaaattgcgtgcgctcgggtttgaggatgag
ggagaggtgcttgtttag
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