KEGG   Tuber melanosporum: GSTUM_00001151001
Entry
GSTUM_00001151001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
tml  Tuber melanosporum
Pathway
tml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GSTUM_00001151001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00001151001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     GSTUM_00001151001
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     GSTUM_00001151001
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 9183081
NCBI-ProteinID: XP_002838548
INRA: GSTUM_00001151001
UniProt: D5GDZ6
LinkDB
AA seq 125 aa
MEGDPPSLPPQMFTTSAQLLDLTDKKLLVALRDGRKLIGVLRSWDQQTLSCRVPSSAYTS
GMRTNVLLLGEIDLDREDDIPFRRASVEEVFAAQRAIDTEKKRTDKVHRKKLRALGFEDE
GEVLV
NT seq 378 nt   +upstreamnt  +downstreamnt
atggagggcgacccaccttctctgcccccgcagatgttcacgacttccgctcagttactc
gatctcaccgataaaaaactcctggtcgcactccgtgatgggagaaagttgattggtgtt
ttaaggtcctgggatcagcaaaccttgtcttgcagagtaccatcgagcgcttatacgtcg
gggatgcgtactaatgtgctgttacttggggagattgacctagatagagaagacgacata
cccttccgtcgcgcctctgttgaggaggtattcgctgcacagagggctatagacactgaa
aagaagagaacggataaagttcataggaagaaattgcgtgcgctcgggtttgaggatgag
ggagaggtgcttgtttag

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