Tuber melanosporum: GSTUM_00001338001
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Entry
GSTUM_00001338001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K13192
RNA-binding protein 26
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tml01009
]
GSTUM_00001338001
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00001338001
03041 Spliceosome [BR:
tml03041
]
GSTUM_00001338001
Protein phosphatases and associated proteins [BR:
tml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
GSTUM_00001338001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
GSTUM_00001338001
Spliceosome [BR:
tml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
GSTUM_00001338001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
RRM_1
zf_CCCH_4
Nup35_RRM_2
RRM_3
DUF6869
TAF4
zf-CCCH
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
9184916
NCBI-ProteinID:
XP_002838813
INRA:
GSTUM_00001338001
UniProt:
D5GER1
LinkDB
All DBs
AA seq
814 aa
AA seq
DB search
MLFEEEDAALLKKWIIKRLEDISDADSDVLADYVLALLRHDQTQEEVQKLCIEQLDDFLH
DHTAQFVKDVFVTLKNQGFMGHVQPQNPQSLITPGVSHSSLVVAGSVVDNRGTEIRGIKR
ERSHFERDREGSSGQDTYSPSMGSARGYKAPRRGGGAPSGPGRWNGGNGNGGGGHAGGGG
PGRGGIGGGSGYGHPQGSVEIPFVPPGGPPVPPAIPQFGMPPIPPPGFPWAIPGPGDPMG
AYLAAQAAAVAWGGFPPIGPPAVGKGEEKKAIEKVGERCKDYDEKGFCMKGDMCPYEHGM
DRYVVPTEASAADGWDLPFPLVAAAFFMANPLAEYDPNNSQLFSADTPTQNNHSNNNNNR
AHGDSRGRGRGRGNRGGGGGGGGGGGGNRGARSEFSGTGPSYDRSNTTLVVEHIPDDKLE
ESAIRAFFSEFGTVLKVDVTADKRLATVKFERWDMARKAYDSPAPIFDNRFVKVFWYKPN
AEQNGTTTAPVVKHKEPSPVADEMEIDMEEFKKKQEEAQKAHEAKMLKKKANEEAAKELE
RRKEELQRMQLEEKRKLEEKLAKKRARSAAASASPPASGTSPAAGGISKTDAQAATTAAL
EAQLRALQAEAESLGIEGGDTVPEYGSYRGRSRGRFPFRGRGGYAPRGRGVYVPVYGSYG
GRGAFPTARGRGGTLKLDNRTRKITVSAADLRGGKDEEFRHYLMNTGLEVEGIEPHPDKD
DTQIVTFKDRRTAEKFIYTGNDIPNVGEVTLAWFNAPPPNPSPSKSEDPSRMDTEENGTS
AASSSAIHHHHINSNDHGDDDVYEDDEGRWLPDE
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgttattcgaagaagaggatgcagcgctattgaagaaatggattattaaacggttggag
gatatttccgacgctgattcggatgtcctggcggattacgtgctcgccttgttgagacat
gatcagacccaggaggaggttcaaaaattgtgtattgagcagttggatgattttcttcat
gatcataccgcgcaattcgttaaggatgtcttcgtcaccctcaagaatcagggttttatg
ggtcacgtacaaccgcagaatccacagtcattgattacacccggggtttctcactcatcg
ttggtggtagcagggtcagtagtggacaatcgcgggacggagattcgggggatcaagagg
gagaggagtcactttgagcgggatagggaagggtcatccggacaggacacatattcgccg
agtatggggagcgcgagaggttacaaagcgccgcgacgcggtggtggtgctccgagtggt
cccgggagatggaatggcgggaatgggaacggtggtggaggtcatgctggcggaggaggc
cctggaaggggtggcattggtggcggcagtggatacggtcatccacaagggtccgtggag
attccgtttgttcctcctggtggccctccggttcccccggctattccccagttcggtatg
ccccccatcccaccccctggatttccctgggctattcctgggcctggtgatcctatgggt
gcatatctggccgcccaggccgctgcggtggcatggggtggtttcccaccaatcggccct
ccggcggtcggaaagggtgaagaaaagaaagctattgaaaaggttggggagaggtgcaag
gattatgatgagaaaggattctgcatgaagggcgatatgtgtccgtatgagcatggaatg
gatcgctatgttgtaccaacagaggcctctgctgcggatggttgggaccttccctttccg
ctcgtcgcagcagccttttttatggctaaccctttggcagaatatgatccaaacaattcg
cagctgttctctgctgatacacctactcagaataatcatagcaataataataacaacagg
gctcatggagatagtagaggccgtggtagaggtaggggaaatcgcggaggaggaggaggt
ggtggtggcggcggcggcggaaacagaggtgctcgatccgaattctcgggtaccggacct
tcctatgatcgcagtaatacaacgcttgtggttgaacatattcccgacgataaactggag
gagtcggccatcagggcgttcttctcggagtttggaactgttttgaaagtggatgtcacc
gcggataaacggcttgccacggtgaagtttgagcgttgggacatggccagaaaggcatac
gactcccccgcccctatattcgataataggttcgtgaaggtattctggtataaacctaat
gcagagcagaatgggactacgacggctccagtggtcaaacataaagaaccgtctcctgtc
gccgatgaaatggaaattgatatggaggagtttaaaaagaagcaagaagaagcccaaaag
gctcacgaggcgaaaatgctcaagaaaaaggccaatgaagaagccgcgaaggagctggaa
agaaggaaagaagagctccagaggatgcagttggaagagaagcgcaaactagaagaaaaa
ttagccaaaaagcgagccagaagtgccgccgcctcggcctcgcccccggcatccgggacg
tccccggccgctgggggcatttctaagactgatgctcaggccgctactactgctgccctc
gaagcgcaattgcgagccctccaggcagaggcagaatctctggggattgagggtggtgat
actgttcctgagtatggctcctaccgaggaagaagtcgcggcaggtttccattcaggggg
agaggcgggtatgctccccgaggaaggggagtctatgttcccgtttatggatcttatggg
ggtcgtggagcgttcccaactgctagaggtagaggtggtaccttgaaattggataatcgt
actcgaaaaattactgtcagtgctgctgatcttaggggtggtaaggatgaggagttcagg
cactaccttatgaacaccggcctagaggttgagggcattgaaccgcatcccgacaaagat
gacacacaaatcgtcacatttaaggatagaagaactgctgagaagttcatctataccgga
aacgacatcccgaacgtcggtgaagtaaccttggcctggttcaatgcaccaccacccaac
ccatcccctagcaaatctgaggatccaagccgaatggacacggaagagaacggcacttca
gcagcaagttcaagtgctattcaccatcaccatatcaattctaacgaccatggagacgat
gacgtctacgaggatgacgaaggccgctggcttccagatgaatga
DBGET
integrated database retrieval system
