Tuber melanosporum: GSTUM_00001460001
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Entry
GSTUM_00001460001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12877
protein mago nashi
Organism
tml
Tuber melanosporum
Pathway
tml03013
Nucleocytoplasmic transport
tml03015
mRNA surveillance pathway
tml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTUM_00001460001
09122 Translation
03013 Nucleocytoplasmic transport
GSTUM_00001460001
03015 mRNA surveillance pathway
GSTUM_00001460001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00001460001
03041 Spliceosome [BR:
tml03041
]
GSTUM_00001460001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
GSTUM_00001460001
Spliceosome [BR:
tml03041
]
Complex C
Other components
EJC/TREX
GSTUM_00001460001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
TASOR_alpha-beta
Motif
Other DBs
NCBI-GeneID:
9187546
NCBI-ProteinID:
XP_002835711
INRA:
GSTUM_00001460001
UniProt:
D5G5S5
LinkDB
All DBs
AA seq
152 aa
AA seq
DB search
MAANNEQFYLRYYSGHSGRFGHEFLEFDFRVLGDGRSATARYANNSNYRNDSLIRKESNS
LMIKEIKRIIKESEIMKEDDSKWPQKNKDGRQELEIRLGNEHISFETAKIGSLVDVQESA
DPEGLRVFYYLVQDLKALVFSLISLHFKIKPI
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaacaacgaacaattctacctccgttactatagcggccatagcggtcgcttc
ggtcatgaattcctagaattcgacttccgagtcctcggcgatggtaggagcgcaacggct
cgttacgctaacaactcaaactaccgtaacgactcgttgatccggaaagagagcaactct
ttgatgattaaggaaattaagaggattatcaaggagagtgagatcatgaaggaagacgat
agtaaatggccgcaaaagaataaggacgggcgtcaggagttggagattcgtctgggcaac
gaacatatctcgttcgaaactgcgaagataggatcgcttgttgacgtccaggaaagtgct
gatcctgaggggttacgtgttttctactaccttgttcaggatctgaaagccttggtgttc
tcgttgatcagtctgcactttaagatcaagcctatttaa
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integrated database retrieval system