Tuber melanosporum: GSTUM_00001472001
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Entry
GSTUM_00001472001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
tml
Tuber melanosporum
Pathway
tml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
GSTUM_00001472001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tml04131
]
GSTUM_00001472001
Membrane trafficking [BR:
tml04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
GSTUM_00001472001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
9187557
NCBI-ProteinID:
XP_002835722
INRA:
GSTUM_00001472001
UniProt:
D5G5T6
LinkDB
All DBs
AA seq
786 aa
AA seq
DB search
MEDQQILLQDALTIVRQQTALMRKCLETPGKLMDALKCSSTLVSELRTSSLGPKQYYELY
MAVFDALRHLSLYLRESHPVNHLADLYELVQYAGNIVPRLYLMITVGTVYMSIEDAPVKE
IMKDMMEMSRGVQHPIRGLFLRYYLSGQSRDYLPTGNGEGPEGNFQDSISFIITNFIEMN
KLWVRLQHQGHSREREKRTQERKELQLLVGSNLVRLSQLVDLETYKNIILAPLLEQVVQC
RDVLAQEYLLEVITQVFPDEFHLHTLDQFLSATARLNPNVNVKAIVIGIMDRLSAYAARE
AEGIPEDVKLYEIFFKQVLNLVNAQNLPIQDIIALLVSLANLALNIYPDRLGISVLSEQS
YTHKKVSEMANSADLHSPQCQQYILNLMLAPVKSYASLFTVLALPSYLPLLHTQSYPTRR
SVAGVVAQNILKNQTKISTPEHAEGIFELLRVLIREGAQQQAGYPGAQAPRKSRDIETDE
TVEEQGRLARIVHLLCSDNNDTQFKLLQTARKAFKEGGDRIRYTTPALITSGIKLARRYK
LREHYDNEWQTMSAALYKFLHQTVTSIYRVGVPDLCLRLFLFCGQVSDQTEFEEVAYEFF
AQAFTVYEEAISDSRAQFQAVCVIANALHSTRNFSKENYDTLITKCAQYGSKLLKKPDQC
RAVYLASHLWWAVEIPARSEDERSPLYRDGKRVLECLQRALRVADACMDTAVSVELFVEI
LNRYVYYFDRQNEAVTVKYLNGLIELIQSNLSSNDSSTTETPRKHFERTLDYIASRDFAG
VVLDPK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcaacagatccttctccaagatgccctcaccattgtccggcaacagacggct
ttgatgcgaaaatgcttggagacgcctgggaagctgatggatgctctgaagtgcagctct
acactggtatcggaacttcgaacgagctcgttgggacctaaacaatattacgagctttac
atggctgtctttgatgctttgaggcatctttctctctatttaagggagagccacccggtg
aatcatctggcagatttgtatgagctagtgcagtatgcaggaaatattgttccacggttg
taccttatgattacggtcgggactgtgtacatgtctatcgaggatgcaccggtcaaagag
attatgaaagatatgatggagatgagtcgtggggttcaacaccctataaggggattgttt
ttgagatattacctgtctggtcaatcacgagattacttacctacggggaacggtgaaggc
cccgaaggtaacttccaagattcgatctccttcataattaccaacttcatcgagatgaac
aagctatgggtccggttgcagcatcaaggtcactcgcgggaacgtgagaagagaacacag
gagaggaaggagcttcaattactggtggggagcaatttggttagattgagtcaacttgtc
gatcttgagacatacaagaatatcatcctagccccgttattggaacaggtagtccaatgc
cgtgatgtattggcgcaagagtatctccttgaagtaataacgcaggttttcccggatgaa
tttcatcttcacacccttgaccaattcctttctgctactgccagacttaacccgaatgta
aatgtcaaggctatagtgattggcattatggatcgactctcagcctatgctgctcgtgag
gccgaaggtattccggaggatgtaaagctgtacgagattttcttcaaacaggtgttaaat
ctggtcaatgcccaaaatcttccaattcaggacataatcgccctcttggtatcgctagcc
aatctggcattgaatatttatccagaccgattaggtatttcagtcctttctgagcaatcg
tatacccacaaaaaggtgtcagaaatggccaacagcgcagatttacactcaccacagtgt
caacaatatatactaaacctcatgcttgcccctgtcaaatcatatgcatcccttttcaca
gtgcttgccttgccaagctacctcccccttttgcacacacaatcatacccaactcgcaga
tctgtagcaggagttgttgcgcagaacattttgaagaaccaaaccaagatctccacccca
gagcatgcagaaggcatattcgagttgctgcgcgtattgattcgggaaggagcacaacaa
caagcaggatatcctggagcacaagcacctaggaagagtagggacattgagacagacgaa
acagttgaggagcaaggtcggctggcaaggatagtacacttattatgtagtgacaataat
gatacccaattcaagctcctgcaaacagctcggaaagcgttcaaagagggtggcgatagg
ataagatatacaaccccggctctaattacctccggaatcaaacttgcccggcgttacaag
ctccgcgagcattatgacaatgagtggcaaaccatgagcgcagctctttataaattcttg
caccagactgtcacctcgatatatcgggttggtgtgccggatttgtgtcttcggcttttc
cttttctgcggtcaagtatcagatcagacggaattcgaagaagtcgcatatgagtttttt
gcacaagcttttaccgtatacgaagaagcaatctcggactctcgggcccagttccaggct
gtgtgtgtcatcgctaatgcgttgcactcgacccgaaacttttcaaaagaaaattacgat
accctgatcactaaatgtgcgcaatatggtagcaagcttctcaagaagccggaccagtgt
cgtgcggtgtacctggcatcacatctttggtgggctgtcgaaataccagccagaagtgag
gatgaaaggtcaccgttgtacagggatggaaagagggttcttgaatgccttcagcgcgca
ctaagggtagcggatgcatgcatggacaccgcagtcagcgtggagcttttcgtggagatt
ctgaatagatacgtatactattttgatcgccaaaacgaggctgttacggtcaagtacctc
aacgggcttatagaactgattcagtccaacctcagctccaatgatagctccaccaccgag
acaccaagaaagcactttgagagaaccctggactatattgcatctagggactttgctggt
gtagttttggacccaaagtag
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