Tuber melanosporum: GSTUM_00001590001
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Entry
GSTUM_00001590001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K22804
structural maintenance of chromosomes protein 6
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00001590001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
GSTUM_00001590001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
DUF7491
SMC_hinge
Semialdhyde_dhC
ABC_tran
Motif
Other DBs
NCBI-GeneID:
9187574
NCBI-ProteinID:
XP_002835739
INRA:
GSTUM_00001590001
UniProt:
D5G5V3
LinkDB
All DBs
AA seq
1122 aa
AA seq
DB search
MPGLKRRRRHDAPTSEEEEEGESSTEEEPTSSRNLVFFISILVAKRPRFNYESDGGGDDD
DLELSSSPRVPDYDFDLEELSTQRAEMEIREEMAIEKPNVPAENGIIQSVTCQNFMCHRW
LEIKFGPFVNFVIGHNGSGKSAILTAITLCLGGKAAATNRGTSMKSLIKEGEDTSRITVK
LKNQGDGFKTEQYGDAILIERNFTRDGSSGYKLKSNDGKAISSKKEELEEICDYFGLQVD
NPMTILTQDSARQFLSSSTNAEKYKFFAKGVNLEQLDQDYALIKNGIDSTDAVLHNKLAD
IDGLKKLMVRANERLDQLKSHETLRDKIEVLVRQMAWAQVRDAEVELEEKVKKTRLAESK
VTKAEAERETASKSFDDAHQAHEEAVDKVNKEKAKLAPVVEAKETAKEAVDNNKKELQGL
LATERELKGSFEGSQRKITETNNEILAEERRLSENDGGRNSRLIEEQEQHEKEAQRARDA
LEDLGAKNAENKSALEVAKREVSKAQRAVDSCAEDLQGAQAHLNQIRKSEQNFMNAFDRK
MPQLLSAINKEQRFKKKPVGPAGVHVTLRDPKWLHIIENLLGSNLNAFLVTDYEDVTILK
KLMREVGLECPVNVISQGRMDLEEPSTNFKTVLRILDITDDNVRRGLIVGNSIEQTILIE
DLQKATDAMEQKRPSDHIGMCFSINKQSPDWGHKLPDVLTFYRQVEDQIDRLRVSSDNAK
HELRNKQEELGRIQRDIGEYRSNRSKLNYEVHKCEDAVDKVKALLEENAQNDGKLETLKA
KLKVWEERKEMNGRQYEEFVVSKENLSAKASQLVAQLRAASQVASLAVKHTEDAQLDEAT
ARRRREQCLANKNHWYEKHRQYEEEAAALRAVAEDARSRVDRYIQAASTVCPRVGVPRGD
STAALDNRLAKLQRELERAEQMLGGTAEEVTAQAQQATLNYTQARDQRASFQELLRIAIS
VYKERLRRWGLFQCYISARARAQFSWMMSERAFKGRLRLEHTWKPAELIIEVQPGQQDTG
NRGPKTLSGGEKSFSTICLLLSLWEAMGSPIRCLDEFDVFMDAINRNISVNMMIRAAERS
IGKQFILITPQTMNNQNTTNQVKIIKMRDPERDNAGQTRIDG
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgcctggattgaagcgtcgtcgtcgccatgatgctcccacatcagaggaggaggaggag
ggggaatcatctacagaggaggagcccacttcgtcgcgcaatcttgtatttttcatatct
atcttggttgcaaagcgtccccgtttcaactatgagagtgacggtggtggcgatgatgat
gatctggagctttcaagctctccccgtgtccctgattatgacttcgaccttgaggaactt
tcgactcagagggccgagatggaaatccgtgaggaaatggcgatagagaagcctaatgtc
cccgctgaaaacggtatcatccagagtgttacatgtcagaacttcatgtgccatcgttgg
ctcgaaataaaattcggcccttttgtcaacttcgtgatcggtcataatggaagtggtaag
agcgcaattcttactgcgataactttatgtcttggaggaaaggcagccgcaacaaaccgc
ggcacttccatgaagagcttgataaaagaaggagaggacacttctcgaattactgtcaag
ttgaagaaccaaggcgatgggttcaaaacagagcaatacggtgatgccatccttatagag
agaaactttacaagagatggtagcagcggttataaacttaagagcaacgatggcaaggcg
atatcctcgaaaaaagaggagcttgaggaaatatgtgactactttggacttcaagtcgac
aatcccatgaccatcctgacgcaagattccgctcggcagttcttatcaagctcaactaat
gccgagaagtacaaatttttcgcaaagggtgtcaatctggaacaactcgatcaggattat
gctctcatcaagaacggaatagatagcacggatgccgttttacacaacaagcttgcggat
atagatggtcttaaaaaacttatggtcagggcgaatgagagattggatcaactcaagagt
catgagacgctccgagataagattgaagtcctggttaggcagatggcttgggctcaggtc
agggatgccgaagtagagttggaagagaaagtcaagaaaacccgtctcgcagagagtaag
gtgaccaaggcggaggccgagcgcgagacagcttcaaaatcttttgacgatgcgcatcaa
gcccatgaggaggctgtagataaagtcaataaagaaaaggctaagctggcccctgtcgtg
gaggctaaagaaactgcaaaagaggctgttgacaataataagaaggagctacagggttta
ctggcgacagagagagagctcaaaggttccttcgaaggaagccagagaaaaattactgaa
actaataacgaaattctcgccgaagagagaaggcttagtgagaacgatggtgggaggaat
tcgcggctgatcgaagaacaagagcagcatgaaaaagaagcccagcgtgcaagggacgct
cttgaggatcttggggcaaaaaatgcagagaataagtcggccctcgaagtggccaagaga
gaggtgtctaaggctcaaagagctgttgactcatgcgccgaagaccttcagggcgctcag
gctcatctgaaccaaatccgaaagtctgaacaaaacttcatgaatgcgtttgatagaaaa
atgccgcaactcctttccgcgatcaacaaggagcaacgttttaaaaagaagcctgttggg
cctgctggagttcacgtaactcttcgagatccgaaatggcttcacatcattgaaaacctc
cttggttcgaatctaaatgcatttttagtcactgattatgaggacgtcacaatactaaaa
aagctaatgcgagaggttggattggaatgcccagtcaacgtcatttcccagggacgaatg
gacctcgaggagccatccaccaatttcaaaaccgtgttaaggattttagacattaccgat
gacaatgtccgacgtggtcttattgtcgggaattcaattgaacagacaatcctcatagag
gatcttcaaaaggcaaccgatgccatggagcagaaaaggcctagtgaccacatcggtatg
tgtttttcaatcaacaagcagtcgcccgactggggacacaagcttccggatgtgctgaca
ttctacaggcaggttgaggaccaaatagatcgacttagggtatcttcagacaatgccaaa
catgaattgcgcaataagcaagaggagctcggaaggattcagcgagacatcggggagtat
cgtagcaatagaagcaagcttaactacgaagttcacaagtgtgaagatgcagttgataaa
gttaaagcgttgttggaagagaatgctcagaacgatgggaaacttgaaaccctcaaagcc
aaactcaaggtctgggaggagcgcaaggagatgaatggtcggcagtacgaggagttcgtt
gtcagcaaggaaaatttgagtgcaaaagcctctcagttggtagctcaactgagagcggcg
agtcaggttgcaagtctagctgtgaagcataccgaggatgcacagcttgatgaagctacc
gcccggcgcaggcgcgaacagtgtctcgccaacaagaatcactggtacgagaagcatcgc
caatacgaagaagaagccgcagcattgagagcggtagctgaggatgcgagatctagagtt
gataggtatattcaagcggcttcaacagtttgtccacgtgttggagttccccgtggagac
tcaaccgcagctttggacaataggctcgcgaaactacagagggaacttgagcgcgcagag
caaatgcttggaggcaccgccgaagaggtaaccgcacaagcccagcaggcaacattgaat
tatacccaagctagggaccaacgcgcctcttttcaagaactcctcaggatagcgattagt
gtctacaaggagcgtctccgccgctggggccttttccagtgttacattagcgcccgcgca
agagcgcaattttcatggatgatgagtgagcgggcatttaagggtcgcttgcgtttagag
cacacctggaaacccgcggaactgatcattgaagtgcagcctggccagcaagatactgga
aatcgtgggccgaagacgctatctggtggtgaaaaatctttctcgaccatatgcctacta
ctttcgttatgggaggcgatggggtccccgattaggtgtctggatgaattcgacgttttt
atggacgccataaaccgcaacattagtgtaaacatgatgatccgagccgccgaaagatct
atagggaaacaattcatcctcattaccccccaaacaatgaataatcaaaatactactaat
caagtcaaaataatcaaaatgcgtgatccggaacgtgacaatgcgggtcaaacccgtatt
gatggttga
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integrated database retrieval system
