Tuber melanosporum: GSTUM_00001611001
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Entry
GSTUM_00001611001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14319
Ran GTPase-activating protein 1
Organism
tml
Tuber melanosporum
Pathway
tml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTUM_00001611001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00001611001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
GSTUM_00001611001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
Prothymosin
Paf1
Motif
Other DBs
NCBI-GeneID:
9187595
NCBI-ProteinID:
XP_002835760
INRA:
GSTUM_00001611001
UniProt:
D5G5X4
LinkDB
All DBs
AA seq
399 aa
AA seq
DB search
MSSKVFILKSRDGKPLKLDTAADIEPHIASLEGNETVEEIRLCGHTFGIKACKALAEVLK
TNKNLQVFNAADIFTGRLISEIPDALSALLTALLTLEHLHTVDLSDNAFGGRLADTLGDF
YARAGPLRHLLLNNNGLGPAGGIIVANSIRQLAVLKASTPAYPPLETIVCGRNRLENGSM
AAWAEAYAAHKSLRTVKMVQNGIRQEGISALLRDGLSKNHGLQTLDLQDNTFTAAGAYAL
AAVVTNWSDLLELGVGDCLLSARGGVLLGEALGLGKNKALKTIRLQYNEIDVKGVEAIKR
AINPSLPKLQRLELNGNKFSEDELVVEQMREIFGDRGFGELDSLSDMEEETDEEDEEDES
DEGEDVVKQAEEAEDAKVPQEKDKKVDALADLLDGAKIA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtaaggtttttattctcaagtctagggacgggaaacccctcaaattagacacc
gctgccgacattgaaccgcatatcgcttccctcgagggcaatgagacggtggaggaaatc
cgactctgcggccacacatttggaatcaaagcctgcaaggcactcgcagaggtcctgaaa
acaaacaagaatctgcaggtcttcaacgcagccgacatctttaccggccgccttatctct
gagattccggacgcactttcagcgctactgacagcgctcttgacccttgagcatttgcat
accgtcgatctctcagacaacgccttcgggggccgtcttgccgatactctgggagatttt
tacgcccgggccggtccattacggcacttgttgctgaacaacaatggtctcggtcctgca
ggtggcatcatagtcgccaactcgattcgtcaactcgcagttctcaaagcctcgaccccg
gcataccctccccttgaaaccatcgtttgcggtcgtaaccgcctcgagaatgggtccatg
gcggcatgggcagaggcttacgccgcgcataagtcgctgaggacagtcaagatggtgcag
aacggtatccgacaggagggcatcagcgcgctcttgagagatggcctttcgaagaaccac
gggctacagactttggacttgcaggacaatacgttcacagcagcaggggcctatgcattg
gcagccgttgtaacgaactggagtgacctactagagctaggggttggagattgtctactc
tctgcccggggaggagtattgctaggggaggcactaggactagggaaaaataaagcgctc
aaaactattagacttcagtataatgaaatcgacgttaaaggtgttgaagctatcaaaagg
gctatcaacccttctctcccgaaacttcaacggttagagcttaatggaaacaagttctcg
gaggatgagttagtcgtcgaacaaatgcgagaaatctttggagatagaggattcggcgaa
ctagattcccttagcgatatggaggaggaaaccgacgaggaggacgaggaggacgagagc
gatgagggcgaagacgtcgtcaaacaggccgaggaagcagaggacgcaaaggtcccacag
gaaaaggacaagaaagtcgatgccctcgcggacttactcgatggagcaaagattgcataa
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