Tuber melanosporum: GSTUM_00001642001 Help Entry GSTUM_00001642001 CDS       T01282                                  Name (RefSeq) hypothetical protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism tml  Tuber melanosporum Pathway tml03020   RNA polymerase tml03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:tml00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     GSTUM_00001642001   09124 Replication and repair    03420 Nucleotide excision repair     GSTUM_00001642001  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tml03021]     GSTUM_00001642001    03400 DNA repair and recombination proteins [BR:tml03400]     GSTUM_00001642001 Enzymes [BR:tml01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      GSTUM_00001642001 Transcription machinery [BR:tml03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      GSTUM_00001642001 DNA repair and recombination proteins [BR:tml03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       GSTUM_00001642001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 PAAR_motif Motif Other DBs NCBI-GeneID:  9187696 NCBI-ProteinID:  XP_002835860 INRA:  GSTUM_00001642001 UniProt:  D5G674 LinkDB All DBs AA seq 620 aa AA seqDB search MVEMIDEDSLLTLDQNTPQSDDGIVLRRYEIMFGPCYLSRPTMTEGDGSTQPMLPQEARL RNLTYSAPMYCELKKKVMARVRYEWDIEEEDEGATKVFIGKMPVMLKSHLNECPYDQGGY FVINGSEKVLIAQERSAANIVQVFKKALPSPTPYVAEIRSAVEKGSRLISSMQIKLFSKG EARGGYNATIKSTLPYIKSDIPIVIVFRALGVVSDEDILNHVCYDRNDTQMLEMMKPCIE EAFVIQDREVALDFIGKRGSSQGINKEKRIRYARDIMQKELLPHISQEEGSETRKAFFLG YMVHRMLQCALERREVDDRDHFGKKRLDLAGPLLAGLFRTLWRKLTKDVYKYLEKCVETS KDFNLTLAVKSNTITNGLKYSLATGNWGEQKKAASSKAGVSQVLNRYTFASTLSHLRRTN TPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSYITIGTPGYPLVDFLS SNDMELLEEYEPQRSPNATKVFVNGVWVGTHRDPLMLAKVVQDVRRQGVVSHEVSIFTDA GRVCRPLFVIDNDPRKEEEGVMIVMTPEDLDLSRQAPINSTTHTWTHCEIHPILFRSPTI ISHPVILINPQWVSKPWVSS NT seq 1863 nt NT seq  +upstreamnt  +downstreamnt atggtggagatgatcgatgaggattcccttttaacactcgatcagaacactcctcagagc gacgatggcattgttttacggagatacgaaatcatgtttggaccttgttacttatcccga cccaccatgactgaaggcgatggttcaacacagcctatgttacctcaggaggcaagatta cgaaaccttacgtattcagcaccaatgtactgcgagcttaaaaagaaggttatggccagg gtcaggtatgaatgggatattgaagaggaagatgagggggcaaccaaagtcttcattggc aaaatgccggtcatgctcaaatcgcatctcaatgaatgcccttacgaccaaggtggttac ttcgttatcaacgggtcagagaaagtcctcattgcccaggagcggagtgccgccaatatt gtacaggtgttcaagaaagcgctaccttcaccaacaccatacgtggctgagattcgaagc gcagtggagaaaggatcacggctcattagtagcatgcagatcaagttgttttcaaaggga gaggcacgaggcgggtacaatgcgaccatcaaatcgacccttccgtatatcaagagcgat atacccatcgttattgtttttcgtgctctcggcgttgtatcagatgaggacattttaaac cacgtctgctacgatcgtaacgacacgcagatgcttgaaatgatgaagccctgtattgag gaagcgtttgttatccaggacagggaggttgctcttgattttatcggcaagcgtggatcc tcacagggaattaataaagaaaagcgtatccggtatgcacgtgacatcatgcagaaggag ttgttgcctcatatctcacaggaagaggggagtgagacgaggaaggctttctttttgggc tacatggtacataggatgctgcaatgtgctctagaacgccgggaagtggacgaccgtgat cactttggaaaaaagaggttggatttggctgggccccttttggcaggacttttccggact ctttggagaaaactcacgaaggatgtctacaaatatctggagaaatgcgttgaaactagc aaagatttcaatctgactttggctgtcaagtctaacactatcaccaatggcttaaaatat tccttggcaacgggtaactggggcgaacaaaagaaagcagcctcttccaaggcgggtgtg tctcaggtgctgaaccggtatacctttgcctctaccctctctcatctacggcgcaccaat actcctattggaagggatgggaaaatcgcaaagccccgccagttgcacaatacccattgg ggactggtttgcccagccgaaacacctgaagggcaagcctgcggccttgtaaaaaacctg tctctgatgtcttatattacgattggcactcccggataccccttggttgactttttgtcg tccaatgatatggagctgcttgaagaatatgagcctcagcggtctcccaatgctactaag gtttttgttaacggggtctgggtcggaacccatcgcgatcccctcatgttagcgaaggtc gttcaagatgtgcgaaggcaaggtgttgtcagccacgaagttagcatctttacagatgcc gggcgggtttgccgtccgcttttcgttatagacaacgaccctcgcaaggaagaagaaggt gttatgattgttatgacacctgaggatctcgatttgtcaagacaggcgccgatcaattct acgactcacacctggacacattgcgagattcatccaatattattccgttccccgaccata atcagtcaccccgtaatacttatcaatccgcaatgggtaagcaagccatgggtgtcttct tga

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