Tuber melanosporum: GSTUM_00001689001
Help
Entry
GSTUM_00001689001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K22803
structural maintenance of chromosomes protein 5
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00001689001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
GSTUM_00001689001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
YwqH-like
AAA_29
NTPase_1
FANCAA
BLOC1_2
AAA_27
COG6_N
Motif
Other DBs
NCBI-GeneID:
9187613
NCBI-ProteinID:
XP_002835778
INRA:
GSTUM_00001689001
UniProt:
D5G5Z2
LinkDB
All DBs
AA seq
1148 aa
AA seq
DB search
MPSLVHKRSTQHFTDNSGPEGLPSRESLVPGGNPKRVRIIPEEMFSDDEFGEDQDGEDSD
VLVKPDMDGIRLPSEADSDLEEEEAMSHGGGEIERNIQPFQPGSIVRIKAENFVTYTAVE
FLPGPNLNMVIGPNGTGKSTIVCAICLGLGSSPANLGRAKEISEFVKHGCDTAVIEIELQ
GKENERNPIIKRKIGRENNTSTFTLNGSPSTPGKITKLVKSYNIQIDNLCQFLPQDRVVE
FAGLTAIDLLTHTQRAAAPPEILGHHENLKKLGKNRKELLNELEIDRNQLASMEARQAAL
QQDVERLRERQEIIKRIELLEKAKPFVKYRVARSLAKDAKDASKVAERELRELEQQVEPM
TEAPKAKRRYQKALERCVVARKKELEAKEAAVTKFKDDVIGKADEKITDITDKMDAARSA
EQTRKQQIVREKEKIAKLKKQLEEGPPEVDLAYYNGKISDSNHEVRDMKAKIDDIDSEIR
PMVERANQITGQISRKNKDLQDLNSVIGVRERMLERMSRDTHQVWQWIKTHQGEFSQEIL
GPPVLTCNVTDPRYADVVESQLGKNDKLALVAQNKTDYRKLLDVCFGAGPESLKLRDVTI
RENSNVPIPPLPMASEEARGLGFDGFTIDFIDGPAPVISMLCQECRIHTTPISFREFTAV
QNKNMESTRINRWITGRNMYTLRRRYGQVMTNVSSIRNAQAFAAQQVDTQAEQEIRRSIG
EMESDLEDVKRKIEELKDSRATFVTKYKAAQAANQKIKTEKVAKQHEAAKYVKLKATLAS
AEEDLKRKMGGGEDYKGSMRRWKSQKEELVMERAVDAQKFANLAKGLVAIHNELILCQIR
LAEAGSDVETLQRRIQDVLRDLETKKTESADLAKHATECAARARALQGACRKIIQGLSPE
ESEFMNQIPPEKNGEDIETDIEAESARLDLLHEGNPNAIKQYEDRATRIRNLEDKIAERE
KNFQKHSAAIAELRGKWEPVIDRLVAKISTAFSKSFEKINCAGEVRVHKEEDEYDKWAIQ
ILVKFRANESLQILNNQRQSGGERAVSTVFYLMALQSLARSPFRVVDEINQGMDPRNERL
VHHRMVSIACQEYTSQYFLITPKLLPDLSYHKRMKVHCIFSGDWLQEDTRLDPDKYLRIG
ARLKTTAH
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgttggtgcacaagcgctctacgcagcactttacggataactccgggcctgaa
ggtctaccatctcgggagtccttagttcccggcggaaatccaaagcgtgttcgtatcata
cctgaggaaatgttctccgacgatgaatttggtgaggatcaagatggcgaggatagcgac
gtgcttgtgaagccagatatggatggaatccgtcttccgtcggaggctgattcagatctg
gaagaggaggaagccatgagtcatggaggaggcgaaatagagcggaatattcaacctttt
cagcctggaagcattgttagaattaaggctgagaatttcgtcacctacacggctgttgaa
ttccttccgggcccaaacttgaacatggttatcgggcctaatggaacgggcaagtcgacc
attgtctgtgctatttgtcttggattgggctctagcccggcaaatcttggccgagcaaag
gaaatttcggagttcgtcaaacacggctgtgatacggctgtcatcgaaatcgaattgcag
ggaaaggaaaatgagagaaacccaatcattaaacggaagattggacgagaaaacaacacc
tccacatttacgctcaatggttcgcctagtacgcctgggaaaattacgaagcttgtaaaa
tcctacaacatccagatagacaatctttgccaatttcttcctcaggaccgtgttgttgag
ttcgctggcttaacggctattgatctattgactcatacccaacgggccgcggcaccccca
gagatccttggtcatcacgaaaatctcaagaagcttggtaaaaaccgaaaggagttgcta
aatgagttagaaatcgaccgtaatcagttggcatcaatggaggcgcgacaggctgcttta
cagcaggatgttgagcgcctacgggagagacaagagattattaaaaggatcgagctgctg
gaaaaggccaaaccctttgttaaataccgagtggcgagaagtctagccaaagatgccaaa
gatgcaagcaaggttgctgaacgggaactccgcgagcttgagcagcaggtcgagccaatg
actgaggcgcccaaggcaaagcgcagatatcagaaggcccttgagaggtgcgtggtggca
aggaagaaggaacttgaagccaaagaggcagcagttacaaagttcaaagatgatgttata
gggaaagccgatgagaagataacagacattaccgataaaatggatgcagctagatcggcg
gaacagactcggaaacagcagatagtgcgagaaaaagaaaaaattgccaaacttaagaag
caattagaggagggtcccccagaagtcgatctggcctattataacgggaagattagtgat
agcaatcatgaggttagagacatgaaagcgaagatcgatgacattgactcagagatcaga
cccatggttgagagggcgaatcagattaccggtcaaataagtcggaagaacaaggatctt
caggatttgaattcggttattggagttcgtgagagaatgcttgaacgcatgagcagggat
acccatcaagtttggcagtggatcaaaacccaccagggtgaattcagccaagaaatactt
ggtcccccagtgttgacctgtaatgttaccgatcccagatacgccgatgttgttgaatcg
cagctcggcaaaaacgacaagcttgcccttgtggcacagaacaaaaccgattatcggaag
ttattggatgtgtgttttggtgctggtcctgagagtctaaagttgcgcgatgttaccatc
agggaaaattccaatgtccccattccgcctttgccgatggcatcagaagaagcgcgaggg
ttggggtttgacggttttactatcgactttatagatggaccagcgcccgttatatcaatg
ctgtgtcaggaatgccgcattcacacaacgcctataagtttcagagagtttactgctgtc
caaaataaaaacatggagagtaccaggattaatagatggatcactgggcgaaatatgtac
acattgcggagacgttatggccaagttatgacaaacgtatcctcgattcgcaatgctcaa
gcctttgctgcgcagcaggttgacacacaagcagagcaggagattcgtcgctccattgga
gagatggaaagtgacttggaggatgtcaagagaaaaatagaggagctgaaggattcaagg
gctacatttgttaccaaatataaggcggcgcaggctgccaaccaaaagatcaagacggaa
aaggttgcaaagcagcatgaggcagcaaagtatgtcaagcttaaggcgactctagcaagt
gctgaggaggatctcaagaggaagatgggaggcggggaagactataaagggagcatgaga
agatggaagtcacagaaagaggaacttgtgatggagagggcagttgatgcacaaaaattc
gcaaaccttgcgaaaggtcttgtggcgatccataacgagttaatcttgtgccagattaga
cttgcagaggcaggctcggatgtcgagaccttgcagaggaggatccaggatgtattacga
gaccttgaaactaagaagactgaatctgctgatctcgcaaaacatgcaactgaatgtgcc
gcccgtgctcgcgcgcttcaaggtgcctgtcgcaagattatacagggactctctcccgaa
gaatcagaattcatgaaccagattcctcccgaaaagaacggcgaagatatcgagacagac
attgaagccgagagtgcccgactcgatttacttcacgaaggaaaccccaacgccattaaa
caatatgaagaccgtgcaaccagaattcggaacctcgaggataaaattgctgagcgagaa
aagaacttccagaaacattctgctgctatagctgaacttcggggtaaatgggagcctgta
attgaccgccttgttgcaaaaatttctaccgccttttcaaagtcctttgagaaaatcaac
tgcgctggcgaggtccgtgtgcacaaggaagaagacgaatacgataagtgggctatacag
attttggtcaagttcagagcaaatgagagtttgcagatcctgaacaatcagcgtcagagt
ggtggcgagagagctgtcagcacagttttctatctaatggcgctgcagagtcttgcgcgt
agtccttttagagttgttgatgaaattaaccaagggatggatcctagaaacgagcgactt
gtccaccataggatggttagtattgcttgccaagaatatacctcgcagtatttcttgatc
acccccaaactcctacctgacctctcctaccacaagcggatgaaggtccattgcatcttc
tctggcgattggctccaggaggacacaaggttggacccggacaaataccttagaatcggg
gctaggttgaaaacaacggcacattaa
DBGET
integrated database retrieval system
