Tuber melanosporum: GSTUM_00002135001
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Entry
GSTUM_00002135001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tml
Tuber melanosporum
Pathway
tml03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GSTUM_00002135001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tml03021
]
GSTUM_00002135001
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00002135001
Transcription machinery [BR:
tml03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
GSTUM_00002135001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
GSTUM_00002135001
PBAF complex
GSTUM_00002135001
GBAF(ncBAF) complex
GSTUM_00002135001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_3
Motif
Other DBs
NCBI-GeneID:
9187198
NCBI-ProteinID:
XP_002836015
INRA:
GSTUM_00002135001
UniProt:
D5G6M9
LinkDB
All DBs
AA seq
650 aa
AA seq
DB search
MDSDNIDFGESPLSGTNAGTPIANNPLGQPHLVADAGTPLGLTPGQPMEDDEQSTGHNPI
HSLQLPANATDGQRKNSPGISTAGSPANANAQQLNIAPEDGDSIMQGAGDSPQKIDAPGS
PGKNGDSAQVEGGQASGAPASPGTEKKRLEETARGYLVEQTHTVVMPSYSTWFDMNVVKD
IERKSLPEFFNNRNRSKTPLVYKDYRDFMVNTYRLNPSEYLTVTACRRNLAGDVCSIMRV
HAFLEQWGLINYQIDPETRPSNIGPPFTGHFRITADTPRGLQPFQPAPGAVTTAGKPHAV
TERAASAGPSKVELNLEIRKNIYDASGNKISGSSQANGHSIDLEDGLLEGLELYNEDWNQ
VAEHVGTRTREQCVIRFLQLPIEDNYLEEKPEQLGPLQYNRTPFTQADNPVMSVVAFLAS
IVDPKVAAAAAKSSIEEMTKNLGQIEESMDVDEPETSSTAGGDPLSPSDDASTSENPLAK
AGTIALAASAARSHALASNEEREMTKLVNAVVNCSLRKLELKLTQFNELEQVLQAERREI
EKGRQQLFLDRLSMKKQCLQVQEQLQRAMVVGGQEGFQIAAQAGQVGGQGPRLAFEQLGA
SMTAAVGSATSTPAPAGSSSSATAVSTTIPQMGMKPVSLENPGGYVAFEA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggattcagacaatatcgatttcggcgaatcgcctttatcaggaactaatgctggcacc
ccgatagccaacaatccgttgggtcagcctcatctcgtcgctgatgcgggaactcctttg
ggactaacaccaggacaacccatggaggatgacgagcagagcactggacacaacccgatt
cactcccttcagcttcccgccaatgcaactgatggacagcgaaaaaattctccgggaatt
tcgaccgctgggtcgccggcaaacgccaatgcgcagcagttaaatatcgcacctgaggat
ggcgattccatcatgcaaggtgctggcgattcccctcaaaaaatcgatgccccaggatcc
cctgggaagaatggcgacagcgcgcaggtggaaggagggcaagcatcgggagcgccagcc
tcacctggaacggagaagaaaaggctggaggagactgcgagggggtatctcgttgagcag
acccacactgtggtcatgccttcttattcaacatggtttgacatgaatgttgtcaaggac
attgagcgcaagtctttacccgagttctttaacaatagaaacagatccaagacgccattg
gtatacaaggactatcgcgatttcatggtcaacacttatcgtctaaacccgtctgaatat
ctcactgtgacagcctgtaggagaaatcttgcaggcgatgtttgctcgataatgcgtgtt
catgcctttttggaacaatggggtttgataaattatcagattgaccctgagacacgtcct
tcgaatattggaccaccttttacaggccatttccggattaccgcagatactcctcgtggt
ctccagcctttccagcccgctcctggagctgtcactacagccggaaaaccccatgccgta
actgagcgcgcagcaagcgctggtccctctaaggtcgaattgaacctggaaatccgtaaa
aacatctacgatgcttctggcaataagattagcggctcatctcaggccaatggacactcg
atagacttggaggatggtctcctcgaggggctcgagctttacaatgaagactggaaccaa
gttgcagaacatgtcggcactcgaacaagagagcagtgtgtaattcgttttctccagctt
ccaattgaggacaactacctcgaagaaaaacctgagcagctaggccccctccaatacaac
cgcacacccttcacccaggccgacaacccagtaatgagcgtagtagccttcctggccagc
atcgttgaccccaaggttgccgcagccgcagccaaaagttctatcgaggaaatgaccaag
aaccttggccagatagaggagagcatggatgttgacgaacccgagacctcctccaccgcc
ggcggcgaccccctctcaccttccgacgacgcctccacctctgaaaaccccctcgcgaag
gccggcacaatcgcccttgctgcgtccgccgcacgctcacatgcacttgcctctaacgaa
gagcgcgaaatgacaaaactcgtcaatgcagttgtgaactgcagcctccgcaagctagag
ctcaaactcacacagtttaacgaactcgagcaagtcctgcaagcagagcgtcgagagatt
gagaaagggagacagcaactattcctggataggctgtccatgaagaaacagtgtttgcag
gtgcaagagcagttacaacgcgctatggttgtcggcggacaggagggcttccagatcgcg
gcgcaggcaggacaagttggcgggcagggccccaggttggctttcgaacagcttggggcg
tcgatgacggcagcggtggggagtgctacttctacccctgcgcccgcgggctcttcgtct
tctgctacggctgtctctaccacgatcccgcagatgggtatgaagccggtatcgctcgag
aacccgggcgggtatgtggcgtttgaagcttag
DBGET
integrated database retrieval system
