Tuber melanosporum: GSTUM_00002396001
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Entry
GSTUM_00002396001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14844
pumilio homology domain family member 6
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00002396001
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00002396001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
GSTUM_00002396001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
GSTUM_00002396001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPL
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
9185915
NCBI-ProteinID:
XP_002842554
INRA:
GSTUM_00002396001
UniProt:
D5G6Z6
LinkDB
All DBs
AA seq
659 aa
AA seq
DB search
MGASKRKQEKTQSATTHKKPRVSEPKIESKTSKKSVLPPRVVESDSDEPDEGGEEEIGNS
DEDSEEEFGGIEDADEDEEMNTGDKEKSKNPGNGASGSSKSKESHTEQKRLAAERKLAKP
YGEIITRSKRIWEQLRRTKLAPEERKKLIAELGQLIKGRVNGLVFRHDASRIVQSALKYG
DKTTKTNITTELKGSYVSLAQSSYGKYLVVKILHYGTPENRKMVVQEFYGHVRKLTKHRE
AALVIEDVFREYATPQQKSALLQEFYGVEFAIFKDLKHKPSLKELLEKSPEKRTVIMKSL
FDQIHGVIKKGATIFTILHKAMLEYTLNTRAGTTETTEFMELVKEHVADIAFTKDGSQVV
IRCMALGTAKDRKVMIKALKPEAISLARSEYGYLVLLSILETVDDTVLVVKSLLPEFQKR
LQELACDKYGRTPLLYPFSERHPRVVPRPALAVLEEIEKLRESTSKKDPATRQSELRTHF
SQPFLQCIAEHAEELIRDSFGCQFITEVLLGSTGDKSPALQALASTAAGNPKTADDGDDP
HVVNTAAVGRMYKTLVTGGHYSSKENKVISITPPLNFHSLLWEQIRPHVNAWAAGAGSFV
VVALLEAEGFPARQEVVKALNRKKLRKAAEEAGNKGANVMLGILEEGGGGGGAKGSEAS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgggggctagcaaacggaagcaggagaagactcaatcggcgactactcacaagaagccg
agagttagtgagcccaaaatcgagagcaaaacgagcaaaaaatctgttcttccgccacga
gttgtcgagagtgactcggacgaaccggatgaggggggtgaggaggagattggcaattcc
gatgaagacagtgaggaagagtttggtggaattgaggacgcagacgaagacgaggaaatg
aataccggcgacaaggagaaatcaaaaaatccagggaacggagcaagtggatcttcaaag
tcgaaggaatcgcacacggaacaaaagcgcctcgccgccgaacgcaaactcgcaaaaccc
tatggagaaatcatcacccgcagcaagcgcatctgggagcagttgcgccggacaaagctc
gcaccagaggagcgcaagaagctcattgctgaactaggccagttgatcaagggccgtgtg
aacggcctcgtttttagacacgacgcatcaagaatcgtacagtctgcgctgaagtatggg
gacaaaacgaccaagacgaatattaccaccgaactgaagggcagttatgtctctttggcg
cagagcagttatggaaagtaccttgttgtcaagatattgcactacggcacccccgaaaac
aggaaaatggtggttcaagagttctatggacacgtccggaaactcaccaagcaccgtgaa
gcagcattagtgattgaggatgtattccgagagtatgcaacaccccagcagaaatctgcg
ctattgcaggaattttatggcgtggagtttgcaattttcaaggatttgaagcacaagccc
tccttgaaggagctcttggaaaaatcaccggaaaaacggactgttataatgaagagtctt
ttcgaccagattcatggtgttattaagaagggcgctactatcttcaccatcctgcataag
gccatgctggaatacacgttgaacacccgggcgggaacaacagaaacaacagaattcatg
gagcttgtcaaagagcatgtcgcagatattgcctttaccaaagacggatcccaagtggtc
attagatgcatggccctaggaaccgcaaaggatcggaaagttatgatcaaagccctaaag
ccagaggcaatctcactggcaagaagcgagtacggctacctcgtgctcctgtcaatcctc
gagacagttgatgacacagtcctggtagtaaaaagcctgctcccggagttccagaagcgg
ctgcaggagcttgcttgcgacaagtatgggcgcacgccacttttgtacccattctcggag
cgtcacccgagagtggtgcctcggccagcacttgcagttttagaagagatagaaaagctc
cgcgagtctactagcaagaaggatccagcgacccgccagagtgaactccgaactcacttc
tcccagccgttcctacagtgcatcgccgagcacgcagaagaactaatccgagactctttc
ggatgccaattcatcacagaggtattactcggtagcacaggcgataaatcccccgcccta
caagccctcgctagcaccgctgccgggaacccaaagactgcagacgacggcgacgaccca
cacgtcgtaaacacagctgccgtcggacggatgtacaagacactagtcacgggcgggcac
tactcttccaaagaaaataaggtgatatcaatcacccccccattgaatttccactccctc
ctgtgggagcagatccgccctcatgtcaatgcctgggcggcaggtgcggggtcgtttgtc
gtagtagcgctactggaagctgagggattcccagcgagacaggaagtggttaaggcactc
aacaggaagaaactgcgcaaagcggcggaggaggcggggaataaaggtgccaatgtcatg
ttgggcatactggaggagggaggaggaggtggaggagcgaaggggagcgaggcgagttga
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